Model info
Transcription factorHNF4A
ModelHNF4A_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusvRGdnCAAAGTYCR
Best auROC (human)0.9847166899563984
Best auROC (mouse)0.9808372425786422
Peak sets in benchmark (human)49
Peak sets in benchmark (mouse)33
Aligned words500
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyHNF-4 (NR2A){2.1.3.2}
HGNC5024
EntrezGene3172
UniProt IDHNF4A_HUMAN
UniProt ACP41235
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.27541
0.0005 5.36451
0.0001 7.61711
PCM
ACGT
01145.088.0209.058.0
02230.017.0213.040.0
0337.09.0428.026.0
0473.022.0201.0204.0
0567.0163.0130.0140.0
064.0452.04.040.0
07474.07.016.03.0
08452.09.035.04.0
09466.00.028.06.0
103.02.0484.011.0
1114.05.096.0385.0
1221.0320.029.0130.0
139.0447.05.039.0
14382.035.042.041.0
PWM
ACGT
010.147-0.3460.509-0.754
020.604-1.920.528-1.114
03-1.189-2.4841.222-1.525
04-0.529-1.6810.470.485
05-0.6130.2630.0390.112
06-3.1261.276-3.126-1.114
071.324-2.694-1.975-3.325
081.276-2.484-1.242-3.126
091.307-4.4-1.454-2.819
10-3.325-3.5731.345-2.311
11-2.096-2.961-0.261.117
12-1.7250.932-1.4210.039
13-2.4841.265-2.961-1.138
141.109-1.242-1.067-1.09