Model info
Transcription factorHnf4a
ModelHNF4A_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensushhvRRdbCARAGKbCWn
Best auROC (human)0.9868788623981766
Best auROC (mouse)0.9884151687489382
Peak sets in benchmark (human)49
Peak sets in benchmark (mouse)33
Aligned words386
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyHNF-4 (NR2A){2.1.3.2}
MGI109128
EntrezGene15378
UniProt IDHNF4A_MOUSE
UniProt ACP49698
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.08931
0.0005 11.82241
0.0001 15.43091
GTEx tissue expression atlas Hnf4a expression
ReMap ChIP-seq dataset list Hnf4a datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0127.025.020.08.089.035.07.029.020.014.016.011.019.023.023.020.0
0267.026.048.014.051.022.09.015.026.014.022.04.013.010.039.06.0
0381.07.061.08.052.02.04.014.054.09.044.011.014.02.020.03.0
0419.04.0171.07.06.01.04.09.013.013.087.016.01.01.029.05.0
0513.04.015.07.04.00.01.014.041.014.091.0145.03.01.014.019.0
064.017.028.012.03.03.01.012.019.024.045.033.014.0116.021.034.0
072.036.00.02.07.0141.00.012.00.081.06.08.02.079.04.06.0
087.01.03.00.0320.08.05.04.09.01.00.00.021.00.07.00.0
09256.010.077.014.06.00.04.00.011.00.04.00.04.00.00.00.0
10220.07.042.08.010.00.00.00.065.04.010.06.012.00.02.00.0
1116.06.0277.08.04.00.03.04.00.02.050.02.00.00.013.01.0
124.01.013.02.06.01.00.01.023.011.056.0253.01.04.02.08.0
134.011.010.09.05.05.01.06.03.014.018.036.023.0191.014.036.0
143.029.03.00.06.0191.03.021.05.032.04.02.06.069.04.08.0
155.05.08.02.0249.023.013.036.011.03.00.00.011.04.012.04.0
1662.079.093.042.015.08.04.08.09.016.02.06.08.09.011.014.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.1110.035-0.184-1.0741.2940.367-1.2010.181-0.184-0.533-0.403-0.767-0.235-0.047-0.047-0.184
021.0120.0740.68-0.5330.741-0.091-0.961-0.4660.074-0.533-0.091-1.723-0.605-0.8590.475-1.347
031.2-1.2010.918-1.0740.76-2.335-1.723-0.5330.797-0.9610.594-0.767-0.533-2.335-0.184-1.983
04-0.235-1.7231.945-1.201-1.347-2.882-1.723-0.961-0.605-0.6051.272-0.403-2.882-2.8820.181-1.517
05-0.605-1.723-0.466-1.201-1.723-4.187-2.882-0.5330.524-0.5331.3161.781-1.983-2.882-0.533-0.235
06-1.723-0.3440.147-0.683-1.983-1.983-2.882-0.683-0.235-0.0050.6160.309-0.5331.558-0.1360.339
07-2.3350.395-4.187-2.335-1.2011.753-4.187-0.683-4.1871.2-1.347-1.074-2.3351.176-1.723-1.347
08-1.201-2.882-1.983-4.1872.571-1.074-1.517-1.723-0.961-2.882-4.187-4.187-0.136-4.187-1.201-4.187
092.348-0.8591.15-0.533-1.347-4.187-1.723-4.187-0.767-4.187-1.723-4.187-1.723-4.187-4.187-4.187
102.197-1.2010.548-1.074-0.859-4.187-4.187-4.1870.982-1.723-0.859-1.347-0.683-4.187-2.335-4.187
11-0.403-1.3472.427-1.074-1.723-4.187-1.983-1.723-4.187-2.3350.721-2.335-4.187-4.187-0.605-2.882
12-1.723-2.882-0.605-2.335-1.347-2.882-4.187-2.882-0.047-0.7670.8332.336-2.882-1.723-2.335-1.074
13-1.723-0.767-0.859-0.961-1.517-1.517-2.882-1.347-1.983-0.533-0.2880.395-0.0472.056-0.5330.395
14-1.9830.181-1.983-4.187-1.3472.056-1.983-0.136-1.5170.279-1.723-2.335-1.3471.041-1.723-1.074
15-1.517-1.517-1.074-2.3352.32-0.047-0.6050.395-0.767-1.983-4.187-4.187-0.767-1.723-0.683-1.723
160.9351.1761.3380.548-0.466-1.074-1.723-1.074-0.961-0.403-2.335-1.347-1.074-0.961-0.767-0.533