Model info
Transcription factorHnf4a
ModelHNF4A_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusvdRdbCAAAGTYCR
Best auROC (human)0.982967943572852
Best auROC (mouse)0.9815642824221709
Peak sets in benchmark (human)49
Peak sets in benchmark (mouse)33
Aligned words500
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyHNF-4 (NR2A){2.1.3.2}
MGI109128
EntrezGene15378
UniProt IDHNF4A_MOUSE
UniProt ACP49698
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.48511
0.0005 5.56551
0.0001 7.75042
GTEx tissue expression atlas Hnf4a expression
ReMap ChIP-seq dataset list Hnf4a datasets
Motifs in JASPAR
PCM
ACGT
01173.094.0166.067.0
02218.015.0195.072.0
0365.017.0375.043.0
0462.027.0207.0204.0
0554.0220.0106.0120.0
0612.0456.01.031.0
07477.06.013.04.0
08402.03.082.013.0
09440.01.052.07.0
101.03.0491.05.0
1111.03.071.0415.0
127.0343.046.0104.0
134.0445.05.046.0
14370.021.055.054.0
PWM
ACGT
010.322-0.2810.281-0.613
020.551-2.0340.44-0.543
03-0.643-1.921.09-1.044
04-0.689-1.4890.50.485
05-0.8230.56-0.163-0.04
06-2.2341.285-3.903-1.358
071.33-2.819-2.163-3.126
081.16-3.325-0.415-2.163
091.25-3.903-0.86-2.694
10-3.903-3.3251.359-2.961
11-2.311-3.325-0.5561.191
12-2.6941.002-0.979-0.181
13-3.1261.261-2.961-0.979
141.077-1.725-0.805-0.823