Model info
Transcription factorOnecut1
ModelHNF6_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusdbTATTGATTddYbdddn
Best auROC (human)
Best auROC (mouse)0.9772040487130234
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)24
Aligned words306
TF familyHD-CUT factors{3.1.9}
TF subfamilyONECUT{3.1.9.1}
MGI1196423
EntrezGene15379
UniProt IDHNF6_MOUSE
UniProt ACO08755
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.32071
0.0005 7.85211
0.0001 14.37961
GTEx tissue expression atlas Onecut1 expression
ReMap ChIP-seq dataset list Onecut1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0111.010.031.022.04.012.02.019.06.011.010.023.09.011.022.082.0
020.01.01.028.00.01.02.041.00.07.04.054.04.09.028.0105.0
034.00.00.00.018.00.00.00.035.00.00.00.0228.00.00.00.0
040.00.00.0285.00.00.00.00.00.00.00.00.00.00.00.00.0
050.00.00.00.00.00.00.00.00.00.00.00.00.028.00.0257.0
060.00.00.00.00.00.028.00.00.00.00.00.00.00.0257.00.0
070.00.00.00.00.00.00.00.0285.00.00.00.00.00.00.00.0
080.00.00.0285.00.00.00.00.00.00.00.00.00.00.00.00.0
090.00.00.00.00.00.00.00.00.00.00.00.00.057.03.0225.0
100.00.00.00.07.011.013.026.00.00.01.02.028.09.083.0105.0
1111.04.09.011.013.06.00.01.071.08.010.08.019.025.036.053.0
1210.019.05.080.07.012.00.024.010.03.07.035.010.015.06.042.0
134.08.011.014.013.012.01.023.02.04.05.07.013.026.033.0109.0
147.02.014.09.026.04.03.017.011.012.019.08.013.011.063.066.0
1525.013.010.09.012.06.01.010.057.013.015.014.019.015.032.034.0
1627.010.018.058.017.05.01.024.014.08.017.019.05.014.010.038.0
1721.06.010.026.010.011.00.016.04.012.014.016.013.020.024.082.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.47-0.5620.5460.207-1.429-0.386-2.0440.063-1.051-0.47-0.5620.251-0.664-0.470.2071.511
02-3.94-2.597-2.5970.445-3.94-2.597-2.0440.823-3.94-0.904-1.4291.096-1.429-0.6640.4451.758
03-1.429-3.94-3.94-3.940.01-3.94-3.94-3.940.666-3.94-3.94-3.942.531-3.94-3.94-3.94
04-3.94-3.94-3.942.754-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94
05-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.940.445-3.942.651
06-3.94-3.94-3.94-3.94-3.94-3.940.445-3.94-3.94-3.94-3.94-3.94-3.94-3.942.651-3.94
07-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.942.754-3.94-3.94-3.94-3.94-3.94-3.94-3.94
08-3.94-3.94-3.942.754-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94
09-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.941.15-1.692.518
10-3.94-3.94-3.94-3.94-0.904-0.47-0.3080.372-3.94-3.94-2.597-2.0440.445-0.6641.5241.758
11-0.47-1.429-0.664-0.47-0.308-1.051-3.94-2.5971.368-0.777-0.562-0.7770.0630.3330.6941.077
12-0.5620.063-1.2221.487-0.904-0.386-3.940.293-0.562-1.69-0.9040.666-0.562-0.168-1.0510.847
13-1.429-0.777-0.47-0.236-0.308-0.386-2.5970.251-2.044-1.429-1.222-0.904-0.3080.3720.6081.795
14-0.904-2.044-0.236-0.6640.372-1.429-1.69-0.046-0.47-0.3860.063-0.777-0.308-0.471.2491.295
150.333-0.308-0.562-0.664-0.386-1.051-2.597-0.5621.15-0.308-0.168-0.2360.063-0.1680.5770.637
160.409-0.5620.011.167-0.046-1.222-2.5970.293-0.236-0.777-0.0460.063-1.222-0.236-0.5620.747
170.162-1.051-0.5620.372-0.562-0.47-3.94-0.105-1.429-0.386-0.236-0.105-0.3080.1140.2931.511