Model info
Transcription factorOnecut1
ModelHNF6_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensushbYATTGATYd
Best auROC (human)
Best auROC (mouse)0.9763061904579198
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)24
Aligned words512
TF familyHD-CUT factors{3.1.9}
TF subfamilyONECUT{3.1.9.1}
MGI1196423
EntrezGene15379
UniProt IDHNF6_MOUSE
UniProt ACO08755
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.3193
0.0005 5.2741
0.0001 8.22465
GTEx tissue expression atlas Onecut1 expression
Motifs in JASPAR
PCM
ACGT
01126.075.065.0234.0
0254.099.0112.0235.0
0320.088.080.0312.0
04496.03.00.01.0
052.00.05.0493.0
065.078.02.0415.0
072.00.0498.00.0
08497.01.00.02.0
093.09.02.0486.0
101.0161.06.0332.0
1171.068.0150.0211.0
PWM
ACGT
010.008-0.503-0.6430.621
02-0.823-0.23-0.1080.626
03-1.77-0.346-0.4390.907
041.369-3.325-4.4-3.903
05-3.573-4.4-2.9611.363
06-2.961-0.464-3.5731.191
07-3.573-4.41.373-4.4
081.371-3.903-4.4-3.573
09-3.325-2.484-3.5731.349
10-3.9030.25-2.8190.969
11-0.556-0.5990.180.519