Model info
Transcription factorHOMEZ
ModelHOMEZ_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length15
Quality
D
Motif rank
0
ConsensusddWWATCGTTTWhhh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words275
TF familyHD-ZF factors{3.1.8}
TF subfamilyZHX{3.1.8.5}
HGNC20164
EntrezGene57594
UniProt IDHOMEZ_HUMAN
UniProt ACQ8IX15
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.09641
0.0005 4.16401
0.0001 6.27701
GTEx tissue expression atlas HOMEZ expression
ReMap ChIP-seq dataset list HOMEZ datasets
Motifs in JASPAR
PCM
ACGT
01111.037.046.080.0
02130.7522.7524.7595.75
03153.011.013.097.0
04182.2533.2519.2539.25
05271.03.00.00.0
060.00.00.0274.0
070.0274.00.00.0
080.00.0274.00.0
0916.00.020.0238.0
1049.00.00.0225.0
1159.00.01.0214.0
1250.2516.2510.25197.25
1359.562.531.5120.5
1453.7554.7545.75119.75
1575.7547.7543.75106.75
PWM
ACGT
010.475-0.599-0.3880.152
020.637-1.063-0.9830.329
030.792-1.729-1.580.342
040.966-0.702-1.219-0.542
051.36-2.765-3.908-3.908
06-3.908-3.908-3.9081.371
07-3.9081.371-3.908-3.908
08-3.908-3.9081.371-3.908
09-1.39-3.908-1.1841.231
10-0.327-3.908-3.9081.175
11-0.146-3.908-3.371.125
12-0.303-1.376-1.7921.044
13-0.138-0.09-0.7540.556
14-0.237-0.219-0.3940.55
150.099-0.352-0.4370.436