Model info
Transcription factorHoxa10
ModelHXA10_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length12
Quality
C
Motif rank
0
ConsensusdnYnRTTTATGh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words10
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX9-13{3.1.1.8}
MGI96171
EntrezGene15395
UniProt IDHXA10_MOUSE
UniProt ACP31310
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.41544
0.0005 6.04892
0.0001 7.35142
GTEx tissue expression atlas Hoxa10 expression
Motifs in JASPAR
PCM
ACGT
011.8130.7143.7913.681
025.1651.9781.9780.879
030.02.9670.9896.044
043.9560.9893.9561.099
055.0550.8793.0770.989
060.8790.00.09.121
070.00.00.010.0
080.9890.00.09.011
0910.00.00.00.0
100.00.00.010.0
110.9890.08.0220.989
124.1761.7580.9893.077
PWM
ACGT
01-0.253-0.8690.3510.325
020.624-0.186-0.186-0.749
03-1.6760.141-0.6760.767
040.388-0.6760.388-0.608
050.605-0.7490.172-0.676
06-0.749-1.676-1.6761.148
07-1.676-1.676-1.6761.235
08-0.676-1.676-1.6761.137
091.235-1.676-1.676-1.676
10-1.676-1.676-1.6761.235
11-0.676-1.6761.028-0.676
120.435-0.276-0.6760.172