Model info
Transcription factorHOXA11
ModelHXA11_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length13
Quality
D
Motif rank
0
ConsensusWWWhnWTTTAhdd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words2642
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX9-13{3.1.1.8}
HGNC5101
EntrezGene3207
UniProt IDHXA11_HUMAN
UniProt ACP31270
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.29141
0.0005 7.05681
0.0001 8.46041
GTEx tissue expression atlas HOXA11 expression
ReMap ChIP-seq dataset list HOXA11 datasets
Motifs in JASPAR
PCM
ACGT
01696.25180.25132.251633.25
021494.0241.0152.0755.0
031754.25349.25163.25375.25
041467.75460.75268.75444.75
05908.0436.0575.0723.0
06297.0139.0189.02017.0
070.00.02.02640.0
080.01.00.02641.0
09790.00.03.01849.0
102595.7514.7516.7514.75
11377.25805.25301.251158.25
12351.75345.751319.75624.75
131066.75359.75762.75452.75
PWM
ACGT
010.053-1.291-1.5960.904
020.815-1.003-1.4590.133
030.975-0.635-1.389-0.563
040.797-0.359-0.895-0.394
050.317-0.414-0.1380.09
06-0.796-1.547-1.2441.114
07-5.818-5.818-5.1171.383
08-5.818-5.407-5.8181.384
090.179-5.818-4.8931.027
101.366-3.679-3.566-3.679
11-0.5580.198-0.7820.56
12-0.627-0.6450.691-0.055
130.478-0.6050.144-0.376