Model info
Transcription factorHoxa7
ModelHXA7_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length15
Quality
D
Motif rank
0
ConsensusvhTMnMnMGAKTRvv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words21
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX6-7{3.1.1.6}
MGI96179
EntrezGene15404
UniProt IDHXA7_MOUSE
UniProt ACP02830
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.17961
0.0005 5.79221
0.0001 7.05161
GTEx tissue expression atlas Hoxa7 expression
ReMap ChIP-seq dataset list Hoxa7 datasets
Motifs in JASPAR
PCM
ACGT
016.7884.6655.7821.76
029.9445.0281.0063.017
034.0221.0060.013.966
042.90513.0731.0062.011
057.9333.0175.0283.017
0613.9663.0170.02.011
073.0172.9053.01710.056
089.9446.0340.03.017
090.01.00615.9782.011
1015.0841.8992.0110.0
110.02.0114.02212.961
121.0060.01.00616.983
134.0222.90512.0670.0
144.0222.90510.0562.011
157.2915.2793.2683.156
PWM
ACGT
010.316-0.0150.173-0.787
020.6660.05-1.147-0.379
03-0.142-1.147-2.0080.986
04-0.410.923-1.147-0.691
050.458-0.3790.05-0.379
060.986-0.379-2.008-0.691
07-0.379-0.41-0.3790.677
080.6660.21-2.008-0.379
09-2.008-1.1471.114-0.691
101.059-0.733-0.691-2.008
11-2.008-0.691-0.1420.915
12-1.147-2.008-1.1471.173
13-0.142-0.410.848-2.008
14-0.142-0.410.677-0.691
150.3810.092-0.315-0.343