Model info
Transcription factorHoxa7
ModelHXA7_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length15
Quality
D
Motif rank
0
ConsensusvhTMnMnMGAKTRvv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words21
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX6-7{3.1.1.6}
MGI96179
EntrezGene15404
UniProt IDHXA7_MOUSE
UniProt ACP02830
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.18321
0.0005 5.78991
0.0001 7.05156
GTEx tissue expression atlas Hoxa7 expression
Motifs in JASPAR
PCM
ACGT
016.7884.6655.7821.76
029.9445.0281.0063.017
034.0221.0060.013.966
042.90513.0731.0062.011
057.9333.0175.0283.017
0613.9663.0170.02.011
073.0172.9053.01710.056
089.9446.0340.03.017
090.01.00615.9782.011
1015.0841.8992.0110.0
110.02.0114.02212.961
121.0060.01.00616.983
134.0222.90512.0670.0
144.0222.90510.0562.011
157.2915.2793.2683.156
PWM
ACGT
010.316-0.0150.173-0.787
020.6660.05-1.147-0.379
03-0.142-1.147-2.0080.986
04-0.410.923-1.147-0.691
050.458-0.3790.05-0.379
060.986-0.379-2.008-0.691
07-0.379-0.41-0.3790.677
080.6660.21-2.008-0.379
09-2.008-1.1471.114-0.691
101.059-0.733-0.691-2.008
11-2.008-0.691-0.1420.915
12-1.147-2.008-1.1471.173
13-0.142-0.410.848-2.008
14-0.142-0.410.677-0.691
150.3810.092-0.315-0.343