Model info
Transcription factorHOXA9
ModelHXA9_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
B
Motif rank
0
ConsensusdTGATTKAYdd
Best auROC (human)0.8830062243531501
Best auROC (mouse)0.7572393321853359
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)8
Aligned words500
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX9-13{3.1.1.8}
HGNC5109
EntrezGene3205
UniProt IDHXA9_HUMAN
UniProt ACP31269
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.42555
0.0005 6.31196
0.0001 8.0424
PCM
ACGT
01230.053.0117.0100.0
0284.04.023.0389.0
0353.05.0420.022.0
04477.2510.254.258.25
0514.254.2514.25467.25
0622.250.2520.25457.25
0719.2534.2563.25383.25
08463.259.2523.254.25
0916.2576.2522.25385.25
1097.2519.25237.25146.25
11138.2530.25246.2585.25
PWM
ACGT
010.604-0.841-0.065-0.22
02-0.392-3.126-1.641.127
03-0.841-2.9611.203-1.681
041.331-2.372-3.082-2.558
05-2.08-3.082-2.081.31
06-1.671-4.251-1.7591.288
07-1.806-1.263-0.6691.112
081.301-2.461-1.63-3.082
09-1.961-0.486-1.6711.117
10-0.248-1.8060.6350.155
110.1-1.3810.672-0.377