Model info
Transcription factorHoxb4
ModelHXB4_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusWKRYWRATKRS
Best auROC (human)0.5025805667454418
Best auROC (mouse)0.9211031247690404
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)12
Aligned words503
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX4{3.1.1.4}
MGI96185
EntrezGene15412
UniProt IDHXB4_MOUSE
UniProt ACP10284
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.33897
0.0005 11.77179
0.0001 14.66981
GTEx tissue expression atlas Hoxb4 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0110.08.051.013.018.013.09.020.07.011.028.07.014.02.0256.033.0
0219.04.024.02.011.011.04.08.0294.027.018.05.027.013.027.06.0
039.092.018.0232.04.018.01.032.00.040.05.028.00.012.01.08.0
043.01.01.08.039.04.06.0113.03.01.01.020.039.02.055.0204.0
0567.01.015.01.06.00.02.00.019.00.044.00.0217.03.0111.014.0
06308.00.01.00.04.00.00.00.0172.00.00.00.015.00.00.00.0
070.08.02.0489.00.00.00.00.00.00.00.01.00.00.00.00.0
080.00.00.00.00.00.05.03.00.01.01.00.027.018.0328.0117.0
091.00.026.00.09.00.010.00.0151.011.0146.026.040.02.078.00.0
106.0113.074.08.01.06.01.05.011.0172.066.011.02.015.08.01.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.114-1.3280.485-0.86-0.543-0.86-1.215-0.439-1.454-1.022-0.108-1.454-0.788-2.5842.0920.054
02-0.49-1.975-0.26-2.584-1.022-1.022-1.975-1.3282.231-0.144-0.543-1.77-0.144-0.86-0.144-1.6
03-1.2151.072-0.5431.994-1.975-0.543-3.1260.023-4.40.244-1.77-0.108-4.4-0.938-3.126-1.328
04-2.234-3.126-3.126-1.3280.219-1.975-1.61.276-2.234-3.126-3.126-0.4390.219-2.5840.561.866
050.756-3.126-0.721-3.126-1.6-4.4-2.584-4.4-0.49-4.40.339-4.41.927-2.2341.259-0.788
062.277-4.4-3.126-4.4-1.975-4.4-4.4-4.41.695-4.4-4.4-4.4-0.721-4.4-4.4-4.4
07-4.4-1.328-2.5842.739-4.4-4.4-4.4-4.4-4.4-4.4-4.4-3.126-4.4-4.4-4.4-4.4
08-4.4-4.4-4.4-4.4-4.4-4.4-1.77-2.234-4.4-3.126-3.126-4.4-0.144-0.5432.341.311
09-3.126-4.4-0.181-4.4-1.215-4.4-1.114-4.41.565-1.0221.532-0.1810.244-2.5840.907-4.4
10-1.61.2760.855-1.328-3.126-1.6-3.126-1.77-1.0221.6950.741-1.022-2.584-0.721-1.328-3.126