Model info
Transcription factorHoxb6
ModelHXB6_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length13
Quality
D
Motif rank
0
ConsensusdWTGATTKATGCn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words7
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX6-7{3.1.1.6}
MGI96187
EntrezGene15414
UniProt IDHXB6_MOUSE
UniProt ACP09023
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.4888200000000005
0.0005 6.21833
0.0001 7.782985
GTEx tissue expression atlas Hoxb6 expression
Motifs in JASPAR
PCM
ACGT
013.3170.6331.5721.478
023.4720.8450.02.683
030.00.8450.06.155
040.8450.06.1550.0
057.00.00.00.0
060.00.00.07.0
070.00.00.07.0
080.8450.03.5282.628
096.1550.00.8450.0
100.00.00.07.0
110.00.06.1550.845
123.4723.5280.00.0
133.5281.7830.8450.845
PWM
ACGT
010.531-0.692-0.083-0.13
020.571-0.519-1.5250.349
03-1.525-0.519-1.5251.088
04-0.519-1.5251.088-1.525
051.208-1.525-1.525-1.525
06-1.525-1.525-1.5251.208
07-1.525-1.525-1.5251.208
08-0.519-1.5250.5850.331
091.088-1.525-0.519-1.525
10-1.525-1.525-1.5251.208
11-1.525-1.5251.088-0.519
120.5710.585-1.525-1.525
130.5850.015-0.519-0.519