Model info
Transcription factorHoxb7
ModelHXB7_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
C
Motif rank
0
ConsensusWTGATTRATK
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words28
TF familyHOX-related factors {3.1.1}
TF subfamilyHOX6-7 {3.1.1.6}
MGIMGI:96188
EntrezGeneGeneID:15415
(SSTAR profile)
UniProt IDHXB7_MOUSE
UniProt ACP09024
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.323320000000001
0.0005 6.380825
0.0001 7.735275
GTEx tissue expression atlas Hoxb7 expression
Motifs in JASPAR
PCM
ACGT
018.1210.2531.15218.462
020.00.00.027.988
032.0230.025.9650.0
0427.9880.00.00.0
050.00.00.027.988
060.00.00.027.988
0713.1510.09.1055.733
0827.0890.8990.00.0
090.01.9110.026.078
102.5291.51715.1748.767
PWM
ACGT
010.134-1.976-1.3720.902
02-2.241-2.241-2.2411.303
03-1.008-2.2411.23-2.241
041.303-2.241-2.241-2.241
05-2.241-2.241-2.2411.303
06-2.241-2.241-2.2411.303
070.58-2.2410.238-0.176
081.271-1.509-2.241-2.241
09-2.241-1.049-2.2411.235
10-0.845-1.2030.7150.204