Model info
Transcription factorHoxb7
ModelHXB7_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
C
Motif rank
0
ConsensusWTGATTRATK
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words28
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX6-7{3.1.1.6}
MGI96188
EntrezGene15415
UniProt IDHXB7_MOUSE
UniProt ACP09024
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.32898
0.0005 6.39242
0.0001 7.76157
GTEx tissue expression atlas Hoxb7 expression
ReMap ChIP-seq dataset list Hoxb7 datasets
Motifs in JASPAR
PCM
ACGT
018.1210.2531.15218.462
020.00.00.027.988
032.0230.025.9650.0
0427.9880.00.00.0
050.00.00.027.988
060.00.00.027.988
0713.1510.09.1055.733
0827.0890.8990.00.0
090.01.9110.026.078
102.5291.51715.1748.767
PWM
ACGT
010.134-1.976-1.3720.902
02-2.241-2.241-2.2411.303
03-1.008-2.2411.23-2.241
041.303-2.241-2.241-2.241
05-2.241-2.241-2.2411.303
06-2.241-2.241-2.2411.303
070.58-2.2410.238-0.176
081.271-1.509-2.241-2.241
09-2.241-1.049-2.2411.235
10-0.845-1.2030.7150.204