Model info
Transcription factorHOXC9
ModelHXC9_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
C
Motif rank
0
ConsensushTTWATKGSh
Best auROC (human)0.8712427605944395
Best auROC (mouse)
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)
Aligned words500
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX9-13{3.1.1.8}
HGNC5130
EntrezGene3225
UniProt IDHXC9_HUMAN
UniProt ACP31274
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.66816
0.0005 6.50914
0.0001 8.29872
PCM
ACGT
01130.078.037.0255.0
0220.014.023.0443.0
034.06.08.0482.0
04112.063.016.0309.0
05480.012.06.02.0
066.012.09.0473.0
0726.02.0227.0245.0
0878.07.0401.014.0
0911.0387.067.035.0
10144.0200.08.0148.0
PWM
ACGT
010.039-0.464-1.1890.707
02-1.77-2.096-1.641.256
03-3.126-2.819-2.5841.34
04-0.108-0.673-1.9750.898
051.336-2.234-2.819-3.573
06-2.819-2.234-2.4841.322
07-1.525-3.5730.5910.667
08-0.464-2.6941.157-2.096
09-2.3111.122-0.613-1.242
100.140.465-2.5840.167