Model info
Transcription factorHOXD12
ModelHXD12_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusnnKTTTAnbdn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8291
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX9-13{3.1.1.8}
HGNC5135
EntrezGene3238
UniProt IDHXD12_HUMAN
UniProt ACP35452
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.19068
0.0005 6.62551
0.0001 7.33097
GTEx tissue expression atlas HOXD12 expression
ReMap ChIP-seq dataset list HOXD12 datasets
Motifs in JASPAR
PCM
ACGT
012370.351151.8221542.921657.387
022364.211908.7751575.2981874.196
031174.568318.9471182.0514046.913
04125.2566.382697.6345833.214
050.00.0299.3846423.095
060.00.63272.8276449.022
076722.480.00.00.0
081618.3171795.294890.7082418.16
09953.2691074.6962228.0892466.425
102731.014910.0281878.7061202.732
111313.2222324.3141649.1371435.807
PWM
ACGT
010.343-0.377-0.085-0.014
020.341-0.614-0.0650.109
03-0.358-1.656-0.3510.878
04-2.58-3.2-0.8771.243
05-6.638-6.638-1.7191.34
06-6.638-6.387-1.8111.344
071.385-6.638-6.638-6.638
08-0.0380.066-0.6340.363
09-0.566-0.4460.2820.383
100.485-0.6120.111-0.334
11-0.2460.324-0.019-0.157