Model info
Transcription factorHoxd4
ModelHXD4_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length8
Quality
D
Motif rank
0
ConsensusKTAATTnW
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX4{3.1.1.4}
MGI96208
EntrezGene15436
UniProt IDHXD4_MOUSE
UniProt ACP10628
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.48155
0.0005 6.09443
0.0001 7.00662
GTEx tissue expression atlas Hoxd4 expression
ReMap ChIP-seq dataset list Hoxd4 datasets
Motifs in JASPAR
PCM
ACGT
010.2470.2472.2195.288
020.00.00.08.0
036.0270.9860.9860.0
047.0140.00.9860.0
050.00.00.08.0
060.00.00.08.0
070.9860.9864.0551.973
083.3150.2471.2333.205
PWM
ACGT
01-1.19-1.190.0830.835
02-1.578-1.578-1.5781.218
030.955-0.515-0.515-1.578
041.095-1.578-0.515-1.578
05-1.578-1.578-1.5781.218
06-1.578-1.578-1.5781.218
07-0.515-0.5150.596-0.011
080.42-1.19-0.3630.391