Model info
Transcription factorIRF1
(GeneCards)
ModelIRF1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length23
Quality
A
Motif rank
0
ConsensusnnRAAnhGAAASYGAAAShvdvn
Best auROC (human)0.997
Best auROC (mouse)0.998
Peak sets in benchmark (human)23
Peak sets in benchmark (mouse)18
Aligned words453
TF familyInterferon-regulatory factors {3.5.3}
TF subfamilyIRF-1 {3.5.3.0.1}
HGNCHGNC:6116
EntrezGeneGeneID:3659
(SSTAR profile)
UniProt IDIRF1_HUMAN
UniProt ACP10914
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.94296
0.0005 6.896260000000001
0.0001 13.245610000000001
GTEx tissue expression atlas IRF1 expression
ReMap ChIP-seq dataset list IRF1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0139.013.083.06.051.08.08.08.019.09.043.011.040.07.033.012.0
0284.011.048.06.029.02.01.05.0107.05.052.03.018.01.012.06.0
03210.05.09.014.08.06.02.03.0102.00.04.07.016.02.01.01.0
04298.09.017.012.011.01.00.01.016.00.00.00.014.01.02.08.0
05122.092.085.040.06.03.00.02.05.07.03.04.06.05.03.07.0
0626.033.020.060.026.043.02.036.030.013.09.039.022.05.016.010.0
074.00.0100.00.058.00.035.01.011.00.036.00.08.00.0137.00.0
0881.00.00.00.00.00.00.00.0307.00.01.00.01.00.00.00.0
09387.00.00.02.00.00.00.00.01.00.00.00.00.00.00.00.0
10388.00.00.00.00.00.00.00.00.00.00.00.02.00.00.00.0
1122.0203.0159.06.00.00.00.00.00.00.00.00.00.00.00.00.0
121.03.00.018.038.051.02.0112.023.019.05.0112.01.01.00.04.0
133.00.060.00.047.01.026.00.01.00.06.00.015.00.0231.00.0
1462.00.04.00.01.00.00.00.0313.00.08.02.00.00.00.00.0
15374.00.00.02.00.00.00.00.012.00.00.00.02.00.00.00.0
16378.01.09.00.00.00.00.00.00.00.00.00.01.00.01.00.0
1718.0157.0189.015.00.01.00.00.00.04.05.01.00.00.00.00.0
181.05.01.011.016.074.05.067.033.042.025.094.04.07.04.01.0
1924.06.024.00.088.010.014.016.016.04.013.02.055.024.074.020.0
20107.017.036.023.022.06.07.09.056.015.036.018.015.07.03.013.0
21107.030.053.010.019.011.03.012.025.013.020.024.019.012.026.06.0
2279.042.032.017.017.019.09.021.031.031.023.017.015.010.010.017.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.464-0.6161.215-1.3570.73-1.084-1.084-1.084-0.245-0.9710.561-0.7780.489-1.2110.299-0.693
021.227-0.7780.67-1.3570.171-2.345-2.892-1.5271.468-1.5270.75-1.993-0.298-2.892-0.693-1.357
032.14-1.527-0.971-0.543-1.084-1.357-2.345-1.9931.42-4.195-1.733-1.211-0.413-2.345-2.892-2.892
042.49-0.971-0.354-0.693-0.778-2.892-4.195-2.892-0.413-4.195-4.195-4.195-0.543-2.892-2.345-1.084
051.5981.3171.2380.489-1.357-1.993-4.195-2.345-1.527-1.211-1.993-1.733-1.357-1.527-1.993-1.211
060.0640.299-0.1950.8920.0640.561-2.3450.3850.205-0.616-0.9710.464-0.101-1.527-0.413-0.87
07-1.733-4.1951.4-4.1950.858-4.1950.357-2.892-0.778-4.1950.385-4.195-1.084-4.1951.714-4.195
081.19-4.195-4.195-4.195-4.195-4.195-4.195-4.1952.519-4.195-2.892-4.195-2.892-4.195-4.195-4.195
092.751-4.195-4.195-2.345-4.195-4.195-4.195-4.195-2.892-4.195-4.195-4.195-4.195-4.195-4.195-4.195
102.753-4.195-4.195-4.195-4.195-4.195-4.195-4.195-4.195-4.195-4.195-4.195-2.345-4.195-4.195-4.195
11-0.1012.1061.863-1.357-4.195-4.195-4.195-4.195-4.195-4.195-4.195-4.195-4.195-4.195-4.195-4.195
12-2.892-1.993-4.195-0.2980.4390.73-2.3451.513-0.057-0.245-1.5271.513-2.892-2.892-4.195-1.733
13-1.993-4.1950.892-4.1950.649-2.8920.064-4.195-2.892-4.195-1.357-4.195-0.476-4.1952.235-4.195
140.924-4.195-1.733-4.195-2.892-4.195-4.195-4.1952.539-4.195-1.084-2.345-4.195-4.195-4.195-4.195
152.717-4.195-4.195-2.345-4.195-4.195-4.195-4.195-0.693-4.195-4.195-4.195-2.345-4.195-4.195-4.195
162.727-2.892-0.971-4.195-4.195-4.195-4.195-4.195-4.195-4.195-4.195-4.195-2.892-4.195-2.892-4.195
17-0.2981.852.035-0.476-4.195-2.892-4.195-4.195-4.195-1.733-1.527-2.892-4.195-4.195-4.195-4.195
18-2.892-1.527-2.892-0.778-0.4131.1-1.5271.0020.2990.5380.0251.339-1.733-1.211-1.733-2.892
19-0.015-1.357-0.015-4.1951.273-0.87-0.543-0.413-0.413-1.733-0.616-2.3450.805-0.0151.1-0.195
201.468-0.3540.385-0.057-0.101-1.357-1.211-0.9710.823-0.4760.385-0.298-0.476-1.211-1.993-0.616
211.4680.2050.769-0.87-0.245-0.778-1.993-0.6930.025-0.616-0.195-0.015-0.245-0.6930.064-1.357
221.1650.5380.269-0.354-0.354-0.245-0.971-0.1470.2370.237-0.057-0.354-0.476-0.87-0.87-0.354