Model info
Transcription factorIRF2
ModelIRF2_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length20
Quality
A
Motif rank
0
ConsensusnRRWvhGAAASYGAAASYvv
Best auROC (human)0.9935095990088767
Best auROC (mouse)
Peak sets in benchmark (human)8
Peak sets in benchmark (mouse)
Aligned words499
TF familyInterferon-regulatory factors{3.5.3}
TF subfamilyIRF-2{3.5.3.0.2}
HGNC6117
EntrezGene3660
UniProt IDIRF2_HUMAN
UniProt ACP14316
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.06236
0.0005 4.426159999999999
0.0001 7.250660000000001
GTEx tissue expression atlas IRF2 expression
ReMap ChIP-seq dataset list IRF2 datasets
Motifs in JASPAR
PCM
ACGT
01142.089.0183.084.0
02306.048.0107.037.0
03355.036.054.053.0
04376.028.039.055.0
05141.099.0192.066.0
06129.0111.063.0195.0
0784.012.0398.04.0
08487.00.010.01.0
09495.01.02.00.0
10484.00.08.06.0
1165.0131.0294.08.0
1244.0109.04.0341.0
1327.05.0459.07.0
14470.05.023.00.0
15492.00.06.00.0
16487.00.06.05.0
173.0188.0290.017.0
1849.0131.032.0286.0
19201.064.0191.042.0
20182.0104.0154.058.0
PWM
ACGT
010.13-0.3310.381-0.388
020.892-0.934-0.149-1.185
031.04-1.211-0.819-0.838
041.097-1.451-1.134-0.802
050.123-0.2260.429-0.624
060.035-0.113-0.6690.444
07-0.388-2.231.154-3.122
081.355-4.397-2.39-3.9
091.371-3.9-3.569-4.397
101.349-4.397-2.58-2.815
11-0.6390.050.852-2.58
12-1.018-0.131-3.1221.0
13-1.485-2.9571.296-2.69
141.319-2.957-1.636-4.397
151.365-4.397-2.815-4.397
161.355-4.397-2.815-2.957
17-3.3210.4080.839-1.916
18-0.9140.05-1.3240.825
190.474-0.6540.424-1.063
200.376-0.1770.21-0.75