Model info
Transcription factorIrf3
ModelIRF3_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length20
Quality
A
Motif rank
0
ConsensusdRRRddRAAAvdGRAASnRR
Best auROC (human)0.7890654898147282
Best auROC (mouse)0.9477784703256861
Peak sets in benchmark (human)6
Peak sets in benchmark (mouse)21
Aligned words505
TF familyInterferon-regulatory factors{3.5.3}
TF subfamilyIRF-3{3.5.3.0.3}
MGI1859179
EntrezGene54131
UniProt IDIRF3_MOUSE
UniProt ACP70671
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.08681
0.0005 6.13271
0.0001 8.28231
GTEx tissue expression atlas Irf3 expression
ReMap ChIP-seq dataset list Irf3 datasets
Motifs in JASPAR
PCM
ACGT
01150.039.0257.054.0
02302.022.0150.026.0
03339.033.0107.021.0
04360.037.055.048.0
05153.054.0228.065.0
06112.027.0279.082.0
07101.027.0366.06.0
08410.09.074.07.0
09408.018.063.011.0
10450.08.015.027.0
11112.0131.0223.034.0
12146.044.0201.0109.0
13100.03.0392.05.0
14337.012.0145.06.0
15440.018.036.06.0
16471.02.020.07.0
1748.0157.0274.021.0
18133.071.0137.0159.0
19114.061.0293.032.0
20341.035.089.035.0
PWM
ACGT
010.18-1.1380.714-0.823
020.875-1.6810.18-1.525
030.99-1.298-0.153-1.725
041.05-1.189-0.805-0.938
050.2-0.8230.595-0.643
06-0.108-1.4890.796-0.415
07-0.21-1.4891.066-2.819
081.179-2.484-0.516-2.694
091.174-1.868-0.673-2.311
101.272-2.584-2.034-1.489
11-0.1080.0460.573-1.27
120.154-1.0220.47-0.135
13-0.22-3.3251.135-2.961
140.984-2.2340.147-2.819
151.25-1.868-1.215-2.819
161.317-3.573-1.77-2.694
17-0.9380.2250.778-1.725
180.061-0.5560.0910.238
19-0.091-0.7050.845-1.328
200.996-1.242-0.335-1.242