Model info
Transcription factorIrf4
ModelIRF4_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusddRWvvRGAAvTGARAvh
Best auROC (human)0.9514956747093334
Best auROC (mouse)0.9811586879769999
Peak sets in benchmark (human)19
Peak sets in benchmark (mouse)61
Aligned words500
TF familyInterferon-regulatory factors{3.5.3}
TF subfamilyIRF-4 (LSIRF, NF-EM5, MUM1, Pip){3.5.3.0.4}
MGI1096873
EntrezGene16364
UniProt IDIRF4_MOUSE
UniProt ACQ64287
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.98701
0.0005 6.03191
0.0001 8.17561
GTEx tissue expression atlas Irf4 expression
ReMap ChIP-seq dataset list Irf4 datasets
Motifs in JASPAR
PCM
ACGT
01186.068.0168.078.0
02289.046.072.093.0
03324.035.071.070.0
04304.018.065.0113.0
05136.076.0255.033.0
06249.082.0145.024.0
07142.06.0339.013.0
0873.011.0410.06.0
09486.01.08.05.0
10456.013.08.023.0
1175.0212.0201.012.0
1249.030.08.0413.0
1317.01.0476.06.0
14422.05.052.021.0
15289.026.0166.019.0
16413.028.023.036.0
17107.0228.0142.023.0
18124.0138.052.0186.0
PWM
ACGT
010.393-0.5990.293-0.464
020.831-0.979-0.543-0.291
030.945-1.242-0.556-0.57
040.881-1.868-0.643-0.1
050.083-0.490.707-1.298
060.683-0.4150.147-1.6
070.126-2.8190.99-2.163
08-0.529-2.3111.179-2.819
091.349-3.903-2.584-2.961
101.285-2.163-2.584-1.64
11-0.5030.5230.47-2.234
12-0.918-1.389-2.5841.187
13-1.92-3.9031.328-2.819
141.208-2.961-0.86-1.725
150.831-1.5250.281-1.818
161.187-1.454-1.64-1.215
17-0.1530.5950.126-1.64
18-0.0080.098-0.860.393