Model info
Transcription factorIRF5
ModelIRF5_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length20
Quality
D
Motif rank
0
ConsensusKAAAGGAAAGCnAAAAGTGM
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words5
TF familyInterferon-regulatory factors{3.5.3}
TF subfamilyIRF-5{3.5.3.0.5}
HGNC6120
EntrezGene3663
UniProt IDIRF5_HUMAN
UniProt ACQ13568
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.23791
0.0005 6.20151
0.0001 8.22581
GTEx tissue expression atlas IRF5 expression
ReMap ChIP-seq dataset list IRF5 datasets
Motifs in JASPAR
PCM
ACGT
010.8890.01.8892.222
023.8890.01.1110.0
035.00.00.00.0
045.00.00.00.0
050.00.04.1110.889
060.8890.04.1110.0
073.1110.01.8890.0
085.00.00.00.0
095.00.00.00.0
101.8890.03.1110.0
110.05.00.00.0
121.1112.1110.8890.889
134.00.01.00.0
145.00.00.00.0
155.00.00.00.0
163.2220.00.01.778
170.02.1112.8890.0
182.2220.00.02.778
190.00.04.1110.889
203.4441.1110.2220.222
PWM
ACGT
01-0.247-1.4130.3270.463
020.954-1.413-0.088-1.413
031.185-1.413-1.413-1.413
041.185-1.413-1.413-1.413
05-1.413-1.4131.005-0.247
06-0.247-1.4131.005-1.413
070.754-1.4130.327-1.413
081.185-1.413-1.413-1.413
091.185-1.413-1.413-1.413
100.327-1.4130.754-1.413
11-1.4131.185-1.413-1.413
12-0.0880.419-0.247-0.247
130.98-1.413-0.164-1.413
141.185-1.413-1.413-1.413
151.185-1.413-1.413-1.413
160.786-1.413-1.4130.277
17-1.4130.4190.689-1.413
180.463-1.413-1.4130.655
19-1.413-1.4131.005-0.247
200.845-0.088-0.973-0.973