Model info
Transcription factorIrf8
ModelIRF8_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length20
Quality
A
Motif rank
0
ConsensusvdddvRGGAASTGAAASYdv
Best auROC (human)
Best auROC (mouse)0.9960072148781145
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)59
Aligned words505
TF familyInterferon-regulatory factors{3.5.3}
TF subfamilyIRF-8 (ICSBP1){3.5.3.0.8}
MGI96395
EntrezGene15900
UniProt IDIRF8_MOUSE
UniProt ACP23611
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.74451
0.0005 5.01291
0.0001 7.61771
GTEx tissue expression atlas Irf8 expression
ReMap ChIP-seq dataset list Irf8 datasets
Motifs in JASPAR
PCM
ACGT
01180.087.0155.078.0
02244.047.0104.0105.0
03284.051.069.096.0
04272.028.077.0123.0
05159.068.0239.034.0
06242.068.0174.016.0
07103.01.0394.02.0
0869.01.0429.01.0
09496.03.01.00.0
10481.08.03.08.0
1169.0159.0261.011.0
1236.033.00.0431.0
139.03.0483.05.0
14434.04.053.09.0
15424.08.061.07.0
16474.08.07.011.0
1753.0207.0233.07.0
1866.0123.029.0282.0
19173.076.0162.089.0
20190.085.0150.075.0
PWM
ACGT
010.361-0.3570.213-0.464
020.663-0.958-0.181-0.172
030.814-0.879-0.584-0.26
040.771-1.454-0.477-0.016
050.238-0.5990.642-1.27
060.655-0.5990.327-1.975
07-0.191-3.9031.14-3.573
08-0.584-3.9031.224-3.903
091.369-3.325-3.903-4.4
101.338-2.584-3.325-2.584
11-0.5840.2380.73-2.311
12-1.215-1.298-4.41.229
13-2.484-3.3251.343-2.961
141.236-3.126-0.841-2.484
151.213-2.584-0.705-2.694
161.324-2.584-2.694-2.311
17-0.8410.50.617-2.694
18-0.628-0.016-1.4210.807
190.322-0.490.256-0.335
200.415-0.380.18-0.503