Model info
Transcription factorIRF9
ModelIRF9_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length12
Quality
C
Motif rank
0
ConsensusGAAAbhGAAACT
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words5
TF familyInterferon-regulatory factors{3.5.3}
TF subfamilyIRF-9 (ISGF-3gamma){3.5.3.0.9}
HGNC6131
EntrezGene10379
UniProt IDIRF9_HUMAN
UniProt ACQ00978
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.48961
0.0005 6.26288
0.0001 7.70005
GTEx tissue expression atlas IRF9 expression
ReMap ChIP-seq dataset list IRF9 datasets
Motifs in JASPAR
PCM
ACGT
011.0710.03.9290.0
025.00.00.00.0
035.00.00.00.0
045.00.00.00.0
050.01.0712.8571.071
060.9523.0950.00.952
070.00.04.0480.952
085.00.00.00.0
095.00.00.00.0
105.00.00.00.0
110.03.0950.01.905
120.00.00.9524.048
PWM
ACGT
01-0.114-1.4130.964-1.413
021.185-1.413-1.413-1.413
031.185-1.413-1.413-1.413
041.185-1.413-1.413-1.413
05-1.413-0.1140.679-0.114
06-0.1990.75-1.413-0.199
07-1.413-1.4130.991-0.199
081.185-1.413-1.413-1.413
091.185-1.413-1.413-1.413
101.185-1.413-1.413-1.413
11-1.4130.75-1.4130.334
12-1.413-1.413-0.1990.991