Model info
Transcription factorIrf9
ModelIRF9_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length12
Quality
C
Motif rank
0
ConsensusGAAAbhGAAACT
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words5
TF familyInterferon-regulatory factors{3.5.3}
TF subfamilyIRF-9 (ISGF-3gamma){3.5.3.0.9}
MGI107587
EntrezGene16391
UniProt IDIRF9_MOUSE
UniProt ACQ61179
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.29714
0.0005 6.09179
0.0001 7.65364
GTEx tissue expression atlas Irf9 expression
Motifs in JASPAR
PCM
ACGT
011.0710.03.9290.0
025.00.00.00.0
035.00.00.00.0
045.00.00.00.0
050.01.0712.8571.071
060.9523.0950.00.952
070.00.04.0480.952
085.00.00.00.0
095.00.00.00.0
105.00.00.00.0
110.03.0950.01.905
120.00.00.9524.048
PWM
ACGT
01-0.114-1.4130.964-1.413
021.185-1.413-1.413-1.413
031.185-1.413-1.413-1.413
041.185-1.413-1.413-1.413
05-1.413-0.1140.679-0.114
06-0.1990.75-1.413-0.199
07-1.413-1.4130.991-0.199
081.185-1.413-1.413-1.413
091.185-1.413-1.413-1.413
101.185-1.413-1.413-1.413
11-1.4130.75-1.4130.334
12-1.413-1.413-0.1990.991