Model info
Transcription factorTCF4
ModelITF2_HUMAN.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
C
Motif rank
0
ConsensusvnvnvvnnvCAGSTGb
Best auROC (human)0.9681285965168547
Best auROC (mouse)
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)
Aligned words471
TF familyE2A-related factors{1.2.1}
TF subfamilySEF2 (E2-2, TCF-4, ITF-2){1.2.1.0.2}
HGNC11634
EntrezGene6925
UniProt IDITF2_HUMAN
UniProt ACP15884
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.029510000000002
0.0005 11.00386
0.0001 14.97176
GTEx tissue expression atlas TCF4 expression
ReMap ChIP-seq dataset list TCF4 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0152.09.035.07.067.035.010.074.033.015.035.031.08.08.034.017.0
0231.038.083.08.026.027.04.010.018.032.052.012.011.024.080.014.0
0312.022.042.010.041.044.012.024.047.063.056.053.06.020.08.010.0
0426.07.063.010.071.027.026.025.039.021.049.09.019.011.058.09.0
0529.014.096.016.025.014.011.016.051.030.085.030.03.013.030.07.0
0632.013.045.018.032.014.09.016.052.063.075.032.05.014.031.019.0
0731.030.045.015.030.040.06.028.046.037.058.019.017.020.033.015.0
0829.020.073.02.071.036.016.04.026.051.063.02.017.05.054.01.0
095.0133.04.01.02.0109.01.00.03.0199.04.00.01.08.00.00.0
108.00.03.00.0435.01.011.02.07.00.02.00.01.00.00.00.0
112.018.0425.06.00.00.01.00.00.02.014.00.00.00.02.00.0
120.02.00.00.00.017.03.00.053.0232.0153.04.00.05.01.00.0
134.01.02.046.013.04.05.0234.08.00.04.0145.01.00.00.03.0
141.00.024.01.01.00.01.03.02.01.08.00.03.02.0415.08.0
153.01.03.00.00.01.01.01.037.0161.0146.0104.02.04.02.04.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.565-1.1540.173-1.3940.8170.173-1.0530.9160.115-0.660.1730.053-1.267-1.2670.144-0.538
020.0530.2551.03-1.267-0.12-0.083-1.915-1.053-0.4820.0850.565-0.877-0.961-0.1990.994-0.727
03-0.877-0.2850.354-1.0530.330.4-0.877-0.1990.4650.7560.6390.584-1.539-0.378-1.267-1.053
04-0.12-1.3940.756-1.0530.875-0.083-0.12-0.1590.28-0.330.506-1.154-0.429-0.9610.674-1.154
05-0.013-0.7271.175-0.597-0.159-0.727-0.961-0.5970.5460.0211.0540.021-2.174-0.7990.021-1.394
060.085-0.7990.422-0.4820.085-0.727-1.154-0.5970.5650.7560.9290.085-1.71-0.7270.053-0.429
070.0530.0210.422-0.660.0210.305-1.539-0.0470.4440.2280.674-0.429-0.538-0.3780.115-0.66
08-0.013-0.3780.903-2.5240.8750.201-0.597-1.915-0.120.5460.756-2.524-0.538-1.710.603-3.068
09-1.711.5-1.915-3.068-2.5241.302-3.068-4.349-2.1741.902-1.915-4.349-3.068-1.267-4.349-4.349
10-1.267-4.349-2.174-4.3492.683-3.068-0.961-2.524-1.394-4.349-2.524-4.349-3.068-4.349-4.349-4.349
11-2.524-0.4822.66-1.539-4.349-4.349-3.068-4.349-4.349-2.524-0.727-4.349-4.349-4.349-2.524-4.349
12-4.349-2.524-4.349-4.349-4.349-0.538-2.174-4.3490.5842.0551.64-1.915-4.349-1.71-3.068-4.349
13-1.915-3.068-2.5240.444-0.799-1.915-1.712.064-1.267-4.349-1.9151.586-3.068-4.349-4.349-2.174
14-3.068-4.349-0.199-3.068-3.068-4.349-3.068-2.174-2.524-3.068-1.267-4.349-2.174-2.5242.636-1.267
15-2.174-3.068-2.174-4.349-4.349-3.068-3.068-3.0680.2281.6911.5931.255-2.524-1.915-2.524-1.915