Model info
Transcription factorTCF4
(GeneCards)
ModelITF2_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
C
Motif rank
0
ConsensusdSCAGSTGbb
Best auROC (human)0.949
Best auROC (mouse)
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)
Aligned words499
TF familyE2A-related factors {1.2.1}
TF subfamilySEF2 (E2-2, TCF-4, ITF-2) {1.2.1.0.2}
HGNCHGNC:11634
EntrezGeneGeneID:6925
(SSTAR profile)
UniProt IDITF2_HUMAN
UniProt ACP15884
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.89238
0.0005 5.799665
0.0001 7.429869999999999
GTEx tissue expression atlas TCF4 expression
ReMap ChIP-seq dataset list TCF4 datasets
Motifs in JASPAR
PCM
ACGT
01153.021.0190.0133.0
0263.073.0340.021.0
0314.0445.026.012.0
04466.04.013.014.0
0515.052.0410.020.0
0647.0293.0149.08.0
0745.03.04.0445.0
082.07.0473.015.0
0942.053.0229.0173.0
1046.0136.0263.052.0
PWM
ACGT
010.206-1.7190.420.067
02-0.667-0.5230.999-1.719
03-2.0911.267-1.519-2.228
041.313-3.121-2.157-2.091
05-2.028-0.8541.185-1.764
06-0.9520.8510.18-2.578
07-0.994-3.319-3.1211.267
08-3.567-2.6891.328-2.028
09-1.061-0.8360.6060.328
10-0.9730.0890.743-0.854