Model info
Transcription factorJDP2
ModelJDP2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length12
Quality
D
Motif rank
0
ConsensusbRATGACGTCAb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words2851
TF familyFos-related factors{1.1.2}
TF subfamilyATF-3-like factors{1.1.2.2}
HGNC17546
EntrezGene122953
UniProt IDJDP2_HUMAN
UniProt ACQ8WYK2
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 0.00201
0.0005 1.40681
0.0001 4.26109
GTEx tissue expression atlas JDP2 expression
ReMap ChIP-seq dataset list JDP2 datasets
Motifs in JASPAR
PCM
ACGT
01400.863770.315686.6921177.231
02446.614357.5671972.795258.125
032553.82470.781366.18144.314
045.5561.6482.4143025.483
054.9451.8032997.89230.461
063031.1131.6111.6110.766
073.292941.1116.52584.175
0824.991.463004.8943.757
0911.94217.98814.9922990.179
10477.6652455.656.7845.055
112881.45348.12753.56651.955
12136.1091156.326359.751382.916
PWM
ACGT
01-0.6360.015-0.10.438
02-0.528-0.7490.954-1.073
031.212-2.347-0.726-2.799
04-4.611-5.339-5.1491.381
05-4.696-5.2971.372-3.154
061.383-5.349-5.349-5.615
07-4.9681.353-4.491-2.178
08-3.339-5.3921.374-4.883
09-3.999-3.639-3.8011.369
10-0.4611.173-2.56-2.783
111.332-2.72-2.617-2.646
12-1.7060.42-0.7430.599