Model info
| Transcription factor | KLF1 (GeneCards) | ||||||||
| Model | KLF1_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dGGGYGKGGShbbS | ||||||||
| Best auROC (human) | 0.944 | ||||||||
| Best auROC (mouse) | 0.973 | ||||||||
| Peak sets in benchmark (human) | 5 | ||||||||
| Peak sets in benchmark (mouse) | 6 | ||||||||
| Aligned words | 492 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors {2.3.1} | ||||||||
| TF subfamily | Krüppel-like factors {2.3.1.2} | ||||||||
| HGNC | HGNC:6345 | ||||||||
| EntrezGene | GeneID:10661 (SSTAR profile) | ||||||||
| UniProt ID | KLF1_HUMAN | ||||||||
| UniProt AC | Q13351 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | KLF1 expression | ||||||||
| ReMap ChIP-seq dataset list | KLF1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 166.0 | 16.0 | 189.0 | 118.0 |
| 02 | 2.0 | 1.0 | 484.0 | 2.0 |
| 03 | 1.0 | 2.0 | 483.0 | 3.0 |
| 04 | 0.0 | 0.0 | 488.0 | 1.0 |
| 05 | 45.0 | 258.0 | 0.0 | 186.0 |
| 06 | 7.0 | 0.0 | 478.0 | 4.0 |
| 07 | 12.0 | 5.0 | 262.0 | 210.0 |
| 08 | 19.0 | 2.0 | 442.0 | 26.0 |
| 09 | 12.0 | 11.0 | 422.0 | 44.0 |
| 10 | 30.0 | 335.0 | 82.0 | 42.0 |
| 11 | 82.0 | 224.0 | 46.0 | 137.0 |
| 12 | 70.0 | 97.0 | 231.0 | 91.0 |
| 13 | 51.0 | 99.0 | 259.0 | 80.0 |
| 14 | 55.0 | 79.0 | 305.0 | 50.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.303 | -1.954 | 0.431 | -0.035 |
| 02 | -3.552 | -3.883 | 1.367 | -3.552 |
| 03 | -3.883 | -3.552 | 1.365 | -3.304 |
| 04 | -4.382 | -4.382 | 1.375 | -3.883 |
| 05 | -0.978 | 0.74 | -4.382 | 0.415 |
| 06 | -2.673 | -4.382 | 1.354 | -3.105 |
| 07 | -2.212 | -2.939 | 0.756 | 0.536 |
| 08 | -1.796 | -3.552 | 1.276 | -1.503 |
| 09 | -2.212 | -2.289 | 1.23 | -1.0 |
| 10 | -1.367 | 1.0 | -0.393 | -1.045 |
| 11 | -0.393 | 0.6 | -0.957 | 0.113 |
| 12 | -0.548 | -0.228 | 0.63 | -0.291 |
| 13 | -0.857 | -0.208 | 0.744 | -0.417 |
| 14 | -0.784 | -0.43 | 0.907 | -0.876 |