Model info
| Transcription factor | KLF4 (GeneCards) | ||||||||
| Model | KLF4_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 10 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dGGGYGKGGY | ||||||||
| Best auROC (human) | 0.888 | ||||||||
| Best auROC (mouse) | 0.983 | ||||||||
| Peak sets in benchmark (human) | 11 | ||||||||
| Peak sets in benchmark (mouse) | 34 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors {2.3.1} | ||||||||
| TF subfamily | Krüppel-like factors {2.3.1.2} | ||||||||
| HGNC | HGNC:6348 | ||||||||
| EntrezGene | GeneID:9314 (SSTAR profile) | ||||||||
| UniProt ID | KLF4_HUMAN | ||||||||
| UniProt AC | O43474 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | KLF4 expression | ||||||||
| ReMap ChIP-seq dataset list | KLF4 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 210.0 | 10.0 | 102.0 | 178.0 |
| 02 | 4.0 | 0.0 | 494.0 | 2.0 |
| 03 | 1.0 | 0.0 | 496.0 | 3.0 |
| 04 | 6.0 | 2.0 | 489.0 | 3.0 |
| 05 | 13.0 | 222.0 | 2.0 | 263.0 |
| 06 | 2.0 | 2.0 | 496.0 | 0.0 |
| 07 | 2.0 | 2.0 | 219.0 | 277.0 |
| 08 | 25.0 | 8.0 | 443.0 | 24.0 |
| 09 | 7.0 | 19.0 | 441.0 | 33.0 |
| 10 | 27.0 | 314.0 | 34.0 | 125.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.514 | -2.394 | -0.201 | 0.35 |
| 02 | -3.126 | -4.4 | 1.365 | -3.573 |
| 03 | -3.903 | -4.4 | 1.369 | -3.325 |
| 04 | -2.819 | -3.573 | 1.355 | -3.325 |
| 05 | -2.163 | 0.569 | -3.573 | 0.737 |
| 06 | -3.573 | -3.573 | 1.369 | -4.4 |
| 07 | -3.573 | -3.573 | 0.555 | 0.789 |
| 08 | -1.561 | -2.584 | 1.256 | -1.6 |
| 09 | -2.694 | -1.818 | 1.252 | -1.298 |
| 10 | -1.489 | 0.914 | -1.27 | 0.0 |