Model info
Transcription factorKlf5
ModelKLF5_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusdRvvvdGGGYGKGGM
Best auROC (human)0.9425968585787555
Best auROC (mouse)0.9847162390757205
Peak sets in benchmark (human)32
Peak sets in benchmark (mouse)23
Aligned words500
TF familyThree-zinc finger Krüppel-related factors{2.3.1}
TF subfamilyKrüppel-like factors{2.3.1.2}
MGI1338056
EntrezGene12224
UniProt IDKLF5_MOUSE
UniProt ACQ9Z0Z7
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.25741
0.0005 4.35711
0.0001 6.60581
GTEx tissue expression atlas Klf5 expression
ReMap ChIP-seq dataset list Klf5 datasets
Motifs in JASPAR
PCM
ACGT
01121.055.0238.085.0
0263.045.0330.061.0
0399.074.0275.051.0
0481.089.0271.058.0
0579.0231.0145.044.0
06231.011.085.0172.0
0722.00.0473.04.0
082.01.0495.01.0
095.04.0488.02.0
10131.0154.01.0213.0
1117.05.0471.06.0
1243.015.0304.0137.0
1321.03.0471.04.0
1429.019.0426.025.0
15101.0297.039.062.0
PWM
ACGT
01-0.03-0.8040.64-0.378
02-0.671-0.9980.965-0.703
03-0.228-0.5140.784-0.877
04-0.425-0.3330.769-0.752
05-0.450.610.149-1.02
060.61-2.309-0.3780.318
07-1.679-4.3981.324-3.124
08-3.571-3.9011.369-3.901
09-2.959-3.1241.355-3.571
100.0480.208-3.9010.53
11-1.918-2.9591.319-2.817
12-1.042-2.0320.8830.093
13-1.723-3.3231.319-3.124
14-1.419-1.8161.219-1.56
15-0.2080.86-1.136-0.687