Model info
| Transcription factor | KLF9 (GeneCards) | ||||||||
| Model | KLF9_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 15 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | SvvGKGGGCGTGKCb | ||||||||
| Best auROC (human) | 0.954 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 256 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors {2.3.1} | ||||||||
| TF subfamily | Krüppel-like factors {2.3.1.2} | ||||||||
| HGNC | HGNC:1123 | ||||||||
| EntrezGene | GeneID:687 (SSTAR profile) | ||||||||
| UniProt ID | KLF9_HUMAN | ||||||||
| UniProt AC | Q13886 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | KLF9 expression | ||||||||
| ReMap ChIP-seq dataset list | KLF9 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 16.0 | 48.0 | 163.0 | 29.0 |
| 02 | 66.0 | 48.0 | 118.0 | 24.0 |
| 03 | 128.0 | 35.0 | 68.0 | 25.0 |
| 04 | 41.0 | 3.0 | 205.0 | 7.0 |
| 05 | 11.0 | 1.0 | 162.0 | 82.0 |
| 06 | 4.0 | 0.0 | 252.0 | 0.0 |
| 07 | 0.0 | 1.0 | 251.0 | 4.0 |
| 08 | 0.0 | 2.0 | 254.0 | 0.0 |
| 09 | 2.0 | 194.0 | 1.0 | 59.0 |
| 10 | 0.0 | 0.0 | 256.0 | 0.0 |
| 11 | 1.0 | 4.0 | 67.0 | 184.0 |
| 12 | 1.0 | 1.0 | 250.0 | 4.0 |
| 13 | 13.0 | 30.0 | 172.0 | 41.0 |
| 14 | 4.0 | 216.0 | 8.0 | 28.0 |
| 15 | 33.0 | 134.0 | 52.0 | 37.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.325 | -0.281 | 0.922 | -0.766 |
| 02 | 0.03 | -0.281 | 0.602 | -0.946 |
| 03 | 0.682 | -0.586 | 0.059 | -0.907 |
| 04 | -0.433 | -2.702 | 1.149 | -2.054 |
| 05 | -1.664 | -3.311 | 0.916 | 0.243 |
| 06 | -2.496 | -3.854 | 1.355 | -3.854 |
| 07 | -3.854 | -3.311 | 1.351 | -2.496 |
| 08 | -3.854 | -2.961 | 1.362 | -3.854 |
| 09 | -2.961 | 1.095 | -3.311 | -0.08 |
| 10 | -3.854 | -3.854 | 1.37 | -3.854 |
| 11 | -3.311 | -2.496 | 0.045 | 1.042 |
| 12 | -3.311 | -3.311 | 1.347 | -2.496 |
| 13 | -1.514 | -0.734 | 0.975 | -0.433 |
| 14 | -2.496 | 1.201 | -1.941 | -0.8 |
| 15 | -0.643 | 0.728 | -0.203 | -0.533 |