Model info
Transcription factorLyl1
ModelLYL1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusvMWbMTGYbhYbbb
Best auROC (human)0.852283686197218
Best auROC (mouse)0.8078848457613762
Peak sets in benchmark (human)23
Peak sets in benchmark (mouse)3
Aligned words453
TF familyTal-related factors{1.2.3}
TF subfamilyTal / HEN-like factors{1.2.3.1}
MGI96891
EntrezGene17095
UniProt IDLYL1_MOUSE
UniProt ACP27792
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.38761
0.0005 6.00671
0.0001 7.24251
GTEx tissue expression atlas Lyl1 expression
ReMap ChIP-seq dataset list Lyl1 datasets
Motifs in JASPAR
PCM
ACGT
0193.0200.092.068.0
0266.0315.012.060.0
03290.023.021.0119.0
0426.057.0222.0148.0
0559.0331.020.043.0
0648.00.03.0402.0
071.080.0367.05.0
083.0135.082.0233.0
0928.094.0100.0231.0
1094.0100.059.0200.0
1120.0232.054.0147.0
1243.0263.050.097.0
1364.085.082.0222.0
1454.0124.0172.0103.0
PWM
ACGT
01-0.1940.563-0.205-0.501
02-0.531.014-2.138-0.624
030.932-1.543-1.6280.049
04-1.428-0.6730.6670.264
05-0.641.064-1.674-0.947
06-0.84-4.318-3.2331.257
07-3.815-0.3421.167-2.867
08-3.2330.174-0.3180.715
09-1.358-0.184-0.1230.706
10-0.184-0.123-0.640.563
11-1.6740.71-0.7260.258
12-0.9470.835-0.801-0.153
13-0.561-0.283-0.3180.667
14-0.7260.090.413-0.094