Model info
Transcription factorNr3c2
ModelMCR_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length17
Quality
D
Motif rank
0
ConsensushAGWMCARSTKGTdGKR
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyGR-like receptors (NR3C){2.1.1.1}
MGI99459
EntrezGene
UniProt IDMCR_MOUSE
UniProt ACQ8VII8
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.36991
0.0005 6.00171
0.0001 7.29701
GTEx tissue expression atlas Nr3c2 expression
ReMap ChIP-seq dataset list Nr3c2 datasets
Motifs in JASPAR
PCM
ACGT
012.7221.7220.7221.833
024.8890.00.02.111
030.8890.06.1110.0
042.8890.02.02.111
053.2222.8890.8890.0
060.05.2220.8890.889
074.1110.00.02.889
081.3891.1674.1670.278
091.1671.3894.1670.278
101.2780.2780.2785.167
110.01.1111.7784.111
121.1110.05.8890.0
133.1110.00.03.889
142.00.02.03.0
150.02.1114.8890.0
160.8890.02.04.111
173.2780.2782.2781.167
PWM
ACGT
010.361-0.012-0.6150.037
020.877-1.525-1.5250.15
03-0.486-1.5251.082-1.525
040.412-1.5250.1060.15
050.5060.412-0.486-1.525
06-1.5250.937-0.486-0.486
070.721-1.525-1.5250.412
08-0.176-0.3020.733-1.074
09-0.302-0.1760.733-1.074
10-0.237-1.074-1.0740.927
11-1.525-0.3360.0120.721
12-0.336-1.5251.048-1.525
130.475-1.525-1.5250.671
140.106-1.5250.1060.444
15-1.5250.150.877-1.525
16-0.486-1.5250.1060.721
170.521-1.0740.212-0.302