Model info
Transcription factorNr3c2
ModelMCR_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length17
Quality
D
Motif rank
0
ConsensushAGWMCARSTKGTdGKR
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyGR-like receptors (NR3C){2.1.1.1}
MGI99459
EntrezGene
UniProt IDMCR_MOUSE
UniProt ACQ8VII8
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.36991
0.0005 6.00171
0.0001 7.29701
GTEx tissue expression atlas Nr3c2 expression
Motifs in JASPAR
PCM
ACGT
012.7221.7220.7221.833
024.8890.00.02.111
030.8890.06.1110.0
042.8890.02.02.111
053.2222.8890.8890.0
060.05.2220.8890.889
074.1110.00.02.889
081.3891.1674.1670.278
091.1671.3894.1670.278
101.2780.2780.2785.167
110.01.1111.7784.111
121.1110.05.8890.0
133.1110.00.03.889
142.00.02.03.0
150.02.1114.8890.0
160.8890.02.04.111
173.2780.2782.2781.167
PWM
ACGT
010.361-0.012-0.6150.037
020.877-1.525-1.5250.15
03-0.486-1.5251.082-1.525
040.412-1.5250.1060.15
050.5060.412-0.486-1.525
06-1.5250.937-0.486-0.486
070.721-1.525-1.5250.412
08-0.176-0.3020.733-1.074
09-0.302-0.1760.733-1.074
10-0.237-1.074-1.0740.927
11-1.525-0.3360.0120.721
12-0.336-1.5251.048-1.525
130.475-1.525-1.5250.671
140.106-1.5250.1060.444
15-1.5250.150.877-1.525
16-0.486-1.5250.1060.721
170.521-1.0740.212-0.302