Model info
Transcription factorMecp2
ModelMECP2_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length7
Quality
C
Motif rank
0
ConsensusSCCGGAG
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words122
TF family
TF subfamily
MGI99918
EntrezGene17257
UniProt IDMECP2_MOUSE
UniProt ACQ9Z2D6
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.02293
0.0005 3.25632
0.0001 4.81026
GTEx tissue expression atlas Mecp2 expression
ReMap ChIP-seq dataset list Mecp2 datasets
Motifs in JASPAR
PCM
ACGT
012.96670.17642.4962.966
020.0118.6040.00.0
030.0118.6040.00.0
040.00.0118.6040.0
050.00.0118.6040.0
0668.2060.050.3990.0
0752.3880.066.2160.0
PWM
ACGT
01-2.0040.8390.348-2.004
02-3.2521.357-3.252-3.252
03-3.2521.357-3.252-3.252
04-3.252-3.2521.357-3.252
05-3.252-3.2521.357-3.252
060.811-3.2520.514-3.252
070.552-3.2520.782-3.252