Model info
Transcription factorMEF2B
ModelMEF2B_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusddddYTATTTWWRK
Best auROC (human)0.9457445585523988
Best auROC (mouse)
Peak sets in benchmark (human)23
Peak sets in benchmark (mouse)
Aligned words500
TF familyRegulators of differentiation{5.1.1}
TF subfamilyMEF-2{5.1.1.1}
HGNC6995
EntrezGene100271849; 4207
UniProt IDMEF2B_HUMAN
UniProt ACQ02080
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.75041
0.0005 6.59741
0.0001 8.30652
GTEx tissue expression atlas MEF2B expression
ReMap ChIP-seq dataset list MEF2B datasets
Motifs in JASPAR
PCM
ACGT
01127.059.0207.0107.0
0297.055.0126.0222.0
03102.018.0136.0244.0
0484.052.0187.0177.0
0524.0386.020.070.0
061.044.01.0454.0
07431.013.016.040.0
0853.010.03.0434.0
0938.03.02.0457.0
1018.024.07.0451.0
1167.059.024.0350.0
1285.028.070.0317.0
13236.00.0244.020.0
1461.026.0348.065.0
PWM
ACGT
010.016-0.7370.5-0.153
02-0.25-0.8050.0080.569
03-0.201-1.8680.0830.663
04-0.392-0.860.3990.344
05-1.61.119-1.77-0.57
06-3.903-1.022-3.9031.281
071.229-2.163-1.975-1.114
08-0.841-2.394-3.3251.236
09-1.163-3.325-3.5731.287
10-1.868-1.6-2.6941.274
11-0.613-0.737-1.61.022
12-0.38-1.454-0.570.923
130.63-4.40.663-1.77
14-0.705-1.5251.016-0.643