Model info
Transcription factorMef2c
ModelMEF2C_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusdddYTATTTWWRKhh
Best auROC (human)0.9560922134976377
Best auROC (mouse)0.9293646427730433
Peak sets in benchmark (human)6
Peak sets in benchmark (mouse)9
Aligned words264
TF familyRegulators of differentiation{5.1.1}
TF subfamilyMEF-2{5.1.1.1}
MGI99458
EntrezGene17260
UniProt IDMEF2C_MOUSE
UniProt ACQ8CFN5
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.38251
0.0005 6.269959999999999
0.0001 8.099365
GTEx tissue expression atlas Mef2c expression
Motifs in JASPAR
PCM
ACGT
0146.037.091.090.0
0259.028.065.0112.0
0329.020.097.0118.0
046.0203.015.040.0
050.014.03.0247.0
06241.01.04.018.0
0735.05.02.0222.0
0828.011.00.0225.0
098.012.01.0243.0
1043.018.07.0196.0
1129.014.022.0199.0
12153.00.0107.04.0
1341.06.0172.045.0
1480.0118.032.034.0
1587.066.019.092.0
PWM
ACGT
01-0.352-0.5630.3160.305
02-0.11-0.83-0.0150.52
03-0.796-1.1470.3780.572
04-2.211.109-1.414-0.487
05-3.878-1.477-2.731.304
061.28-3.338-2.525-1.246
07-0.616-2.355-2.9891.198
08-0.83-1.693-3.8781.212
09-1.97-1.616-3.3381.288
10-0.417-1.246-2.0831.075
11-0.796-1.477-1.0581.09
120.829-3.8780.475-2.525
13-0.464-2.210.945-0.373
140.1890.572-0.702-0.644
150.2710.0-1.1950.326