Model info
Transcription factorMEF2D
ModelMEF2D_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusdKYTATTTWTAR
Best auROC (human)0.8428572470894959
Best auROC (mouse)0.9647174142929478
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)27
Aligned words500
TF familyRegulators of differentiation{5.1.1}
TF subfamilyMEF-2{5.1.1.1}
HGNC6997
EntrezGene4209
UniProt IDMEF2D_HUMAN
UniProt ACQ14814
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.98601
0.0005 5.99668
0.0001 8.04836
GTEx tissue expression atlas MEF2D expression
ReMap ChIP-seq dataset list MEF2D datasets
Motifs in JASPAR
PCM
ACGT
01156.028.0151.0165.0
0234.032.0250.0184.0
0312.0379.030.079.0
041.010.03.0486.0
05485.01.01.013.0
0627.03.02.0468.0
0740.06.04.0450.0
0847.020.03.0430.0
09149.043.06.0302.0
1043.07.027.0423.0
11377.00.0118.05.0
1247.016.0393.044.0
PWM
ACGT
010.219-1.4540.1870.275
02-1.27-1.3280.6870.383
03-2.2341.101-1.389-0.452
04-3.903-2.394-3.3251.349
051.347-3.903-3.903-2.163
06-1.489-3.325-3.5731.311
07-1.114-2.819-3.1261.272
08-0.958-1.77-3.3251.227
090.174-1.044-2.8190.875
10-1.044-2.694-1.4891.21
111.096-4.4-0.057-2.961
12-0.958-1.9751.137-1.022