Model info
Transcription factorMef2d
ModelMEF2D_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusnndKCTATTTWTAKv
Best auROC (human)0.8080398756036009
Best auROC (mouse)0.973375065587432
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)27
Aligned words373
TF familyRegulators of differentiation{5.1.1}
TF subfamilyMEF-2{5.1.1.1}
MGI99533
EntrezGene17261
UniProt IDMEF2D_MOUSE
UniProt ACQ63943
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.28261
0.0005 11.23271
0.0001 15.24571
GTEx tissue expression atlas Mef2d expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0121.015.035.015.029.016.011.021.016.028.035.028.011.012.065.015.0
0228.02.028.019.023.06.09.033.055.05.046.040.010.04.034.031.0
036.08.076.026.01.03.03.010.010.05.074.028.012.013.047.051.0
040.024.05.00.00.028.01.00.04.0149.013.034.00.0101.01.013.0
050.00.00.04.01.09.00.0292.00.02.00.018.00.01.01.045.0
061.00.00.00.011.00.01.00.01.00.00.00.0331.04.017.07.0
0738.00.00.0306.00.02.00.02.04.01.00.013.02.00.00.05.0
0819.00.05.020.02.00.00.01.00.00.00.00.032.00.05.0289.0
0913.00.00.040.00.00.00.00.02.03.01.04.019.014.02.0275.0
1029.01.00.04.02.09.00.06.01.01.00.01.0106.031.04.0178.0
1111.01.03.0123.05.06.02.029.00.00.00.04.021.02.017.0149.0
1222.01.014.00.08.00.01.00.07.00.015.00.0237.02.064.02.0
1328.03.0222.021.02.00.00.01.06.03.068.017.00.01.01.00.0
149.020.04.03.01.02.00.04.094.0128.046.023.06.025.05.03.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.103-0.4320.401-0.4320.215-0.369-0.734-0.103-0.3690.1810.4010.181-0.734-0.6491.015-0.432
020.181-2.3020.181-0.201-0.013-1.313-0.9270.3430.849-1.4840.6720.533-0.826-1.690.3720.281
03-1.313-1.041.1710.107-2.85-1.95-1.95-0.826-0.826-1.4841.1440.181-0.649-0.5720.6930.774
04-4.1590.029-1.484-4.159-4.1590.181-2.85-4.159-1.691.842-0.5720.372-4.1591.454-2.85-0.572
05-4.159-4.159-4.159-1.69-2.85-0.927-4.1592.513-4.159-2.302-4.159-0.254-4.159-2.85-2.850.65
06-2.85-4.159-4.159-4.159-0.734-4.159-2.85-4.159-2.85-4.159-4.159-4.1592.638-1.69-0.31-1.167
070.483-4.159-4.1592.56-4.159-2.302-4.159-2.302-1.69-2.85-4.159-0.572-2.302-4.159-4.159-1.484
08-0.201-4.159-1.484-0.151-2.302-4.159-4.159-2.85-4.159-4.159-4.159-4.1590.312-4.159-1.4842.503
09-0.572-4.159-4.1590.533-4.159-4.159-4.159-4.159-2.302-1.95-2.85-1.69-0.201-0.5-2.3022.453
100.215-2.85-4.159-1.69-2.302-0.927-4.159-1.313-2.85-2.85-4.159-2.851.5020.281-1.692.019
11-0.734-2.85-1.951.65-1.484-1.313-2.3020.215-4.159-4.159-4.159-1.69-0.103-2.302-0.311.842
12-0.057-2.85-0.5-4.159-1.04-4.159-2.85-4.159-1.167-4.159-0.432-4.1592.305-2.3021.0-2.302
130.181-1.952.24-0.103-2.302-4.159-4.159-2.85-1.313-1.951.06-0.31-4.159-2.85-2.85-4.159
14-0.927-0.151-1.69-1.95-2.85-2.302-4.159-1.691.3821.690.672-0.013-1.3130.069-1.484-1.95