Model info
Transcription factorMef2d
ModelMEF2D_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusdKYTATTTWTAKhh
Best auROC (human)0.8117341070621057
Best auROC (mouse)0.9701482212689309
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)27
Aligned words500
TF familyRegulators of differentiation{5.1.1}
TF subfamilyMEF-2{5.1.1.1}
MGI99533
EntrezGene17261
UniProt IDMEF2D_MOUSE
UniProt ACQ63943
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.7084600000000005
0.0005 5.72101
0.0001 7.81906
GTEx tissue expression atlas Mef2d expression
Motifs in JASPAR
PCM
ACGT
01147.030.0151.0172.0
0236.037.0244.0183.0
0313.0377.030.080.0
041.012.03.0484.0
05481.00.02.017.0
0629.02.02.0467.0
0740.011.04.0445.0
0845.016.03.0436.0
09148.045.07.0300.0
1038.05.025.0432.0
11382.00.0112.06.0
1243.017.0394.046.0
13151.0237.032.080.0
14155.0143.043.0159.0
PWM
ACGT
010.16-1.3890.1870.316
02-1.215-1.1890.6630.377
03-2.1631.096-1.389-0.439
04-3.903-2.234-3.3251.345
051.338-4.4-3.573-1.92
06-1.421-3.573-3.5731.309
07-1.114-2.311-3.1261.261
08-1.0-1.975-3.3251.241
090.167-1.0-2.6940.868
10-1.163-2.961-1.5611.231
111.109-4.4-0.108-2.819
12-1.044-1.921.14-0.979
130.1870.634-1.328-0.439
140.2130.133-1.0440.238