Model info
| Transcription factor | MEIS1 (GeneCards) | ||||||||
| Model | MEIS1_HUMAN.H11MO.1.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 9 | ||||||||
| Quality | B | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | dhTGACARv | ||||||||
| Best auROC (human) | 0.778 | ||||||||
| Best auROC (mouse) | 0.854 | ||||||||
| Peak sets in benchmark (human) | 2 | ||||||||
| Peak sets in benchmark (mouse) | 37 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | TALE-type homeo domain factors {3.1.4} | ||||||||
| TF subfamily | MEIS {3.1.4.2} | ||||||||
| HGNC | HGNC:7000 | ||||||||
| EntrezGene | GeneID:4211 (SSTAR profile) | ||||||||
| UniProt ID | MEIS1_HUMAN | ||||||||
| UniProt AC | O00470 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | MEIS1 expression | ||||||||
| ReMap ChIP-seq dataset list | MEIS1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 88.0 | 56.0 | 269.0 | 87.0 |
| 02 | 133.0 | 229.0 | 64.0 | 74.0 |
| 03 | 76.0 | 2.0 | 13.0 | 409.0 |
| 04 | 1.0 | 2.0 | 496.0 | 1.0 |
| 05 | 474.0 | 19.0 | 7.0 | 0.0 |
| 06 | 20.0 | 476.0 | 4.0 | 0.0 |
| 07 | 475.0 | 1.0 | 4.0 | 20.0 |
| 08 | 63.0 | 36.0 | 343.0 | 58.0 |
| 09 | 137.0 | 166.0 | 145.0 | 52.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.346 | -0.788 | 0.76 | -0.357 |
| 02 | 0.061 | 0.6 | -0.658 | -0.516 |
| 03 | -0.49 | -3.573 | -2.163 | 1.177 |
| 04 | -3.903 | -3.573 | 1.369 | -3.903 |
| 05 | 1.324 | -1.818 | -2.694 | -4.4 |
| 06 | -1.77 | 1.328 | -3.126 | -4.4 |
| 07 | 1.326 | -3.903 | -3.126 | -1.77 |
| 08 | -0.673 | -1.215 | 1.002 | -0.754 |
| 09 | 0.091 | 0.281 | 0.147 | -0.86 |