Model info
Transcription factorMeis1
ModelMEIS1_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
1
ConsensusbWShTGACAKvh
Best auROC (human)0.7076208444873128
Best auROC (mouse)0.8910057855811786
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)37
Aligned words500
TF familyTALE-type homeo domain factors{3.1.4}
TF subfamilyMEIS{3.1.4.2}
MGI104717
EntrezGene17268
UniProt IDMEIS1_MOUSE
UniProt ACQ60954
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.39342
0.0005 6.16942
0.0001 7.70773
GTEx tissue expression atlas Meis1 expression
ReMap ChIP-seq dataset list Meis1 datasets
Motifs in JASPAR
PCM
ACGT
0156.0136.0199.0109.0
0278.043.054.0325.0
0330.068.0359.043.0
04168.0174.070.088.0
0553.05.036.0406.0
064.024.0471.01.0
07464.03.032.01.0
0832.0448.014.06.0
09467.03.01.029.0
1071.011.0318.0100.0
11128.0176.0148.048.0
12130.085.071.0214.0
PWM
ACGT
01-0.7880.0830.46-0.135
02-0.464-1.044-0.8230.948
03-1.389-0.5991.047-1.044
040.2930.327-0.57-0.346
05-0.841-2.961-1.2151.17
06-3.126-1.61.317-3.903
071.303-3.325-1.328-3.903
08-1.3281.268-2.096-2.819
091.309-3.325-3.903-1.421
10-0.556-2.3110.926-0.22
110.0230.3390.167-0.938
120.039-0.38-0.5560.533