Model info
Transcription factorMeis1
ModelMEIS1_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
1
ConsensusbWShTGACAKvh
Best auROC (human)0.7076208444873128
Best auROC (mouse)0.8910057855811786
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)37
Aligned words500
TF familyTALE-type homeo domain factors{3.1.4}
TF subfamilyMEIS{3.1.4.2}
MGI104717
EntrezGene17268
UniProt IDMEIS1_MOUSE
UniProt ACQ60954
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.39712
0.0005 6.1657649999999995
0.0001 7.7056700000000005
GTEx tissue expression atlas Meis1 expression
Motifs in JASPAR
PCM
ACGT
0156.0136.0199.0109.0
0278.043.054.0325.0
0330.068.0359.043.0
04168.0174.070.088.0
0553.05.036.0406.0
064.024.0471.01.0
07464.03.032.01.0
0832.0448.014.06.0
09467.03.01.029.0
1071.011.0318.0100.0
11128.0176.0148.048.0
12130.085.071.0214.0
PWM
ACGT
01-0.7880.0830.46-0.135
02-0.464-1.044-0.8230.948
03-1.389-0.5991.047-1.044
040.2930.327-0.57-0.346
05-0.841-2.961-1.2151.17
06-3.126-1.61.317-3.903
071.303-3.325-1.328-3.903
08-1.3281.268-2.096-2.819
091.309-3.325-3.903-1.421
10-0.556-2.3110.926-0.22
110.0230.3390.167-0.938
120.039-0.38-0.5560.533