Model info
| Transcription factor | MEOX2 (GeneCards) | ||||||||
| Model | MEOX2_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | HT-SELEX | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | hTAATTAbndh | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 40067 | ||||||||
| TF family | HOX-related factors {3.1.1} | ||||||||
| TF subfamily | MEOX {3.1.1.14} | ||||||||
| HGNC | HGNC:7014 | ||||||||
| EntrezGene | GeneID:4223 (SSTAR profile) | ||||||||
| UniProt ID | MEOX2_HUMAN | ||||||||
| UniProt AC | P50222 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | MEOX2 expression | ||||||||
| ReMap ChIP-seq dataset list | MEOX2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 6932.982 | 7571.286 | 4944.791 | 19698.708 |
| 02 | 1420.216 | 2298.913 | 1094.875 | 34333.764 |
| 03 | 34395.033 | 388.969 | 3891.752 | 472.013 |
| 04 | 38746.834 | 121.495 | 169.226 | 110.212 |
| 05 | 77.864 | 366.004 | 249.113 | 38454.786 |
| 06 | 4.159 | 5.391 | 14222.127 | 24916.089 |
| 07 | 37178.054 | 34.908 | 1881.315 | 53.489 |
| 08 | 2307.41 | 15278.673 | 6120.096 | 15441.588 |
| 09 | 6255.592 | 8645.633 | 13314.527 | 10932.015 |
| 10 | 17845.619 | 4054.785 | 4134.98 | 13112.384 |
| 11 | 9935.145 | 4078.684 | 2949.599 | 22184.339 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.345 | -0.257 | -0.682 | 0.699 |
| 02 | -1.929 | -1.448 | -2.188 | 1.255 |
| 03 | 1.257 | -3.219 | -0.922 | -3.026 |
| 04 | 1.376 | -4.368 | -4.042 | -4.463 |
| 05 | -4.801 | -3.279 | -3.661 | 1.368 |
| 06 | -7.272 | -7.105 | 0.374 | 0.934 |
| 07 | 1.334 | -5.563 | -1.648 | -5.161 |
| 08 | -1.444 | 0.445 | -0.469 | 0.456 |
| 09 | -0.447 | -0.124 | 0.308 | 0.111 |
| 10 | 0.601 | -0.881 | -0.861 | 0.292 |
| 11 | 0.015 | -0.875 | -1.199 | 0.818 |