Model info
Transcription factorMitf
ModelMITF_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusnbChYGTGAShn
Best auROC (human)0.995231777428939
Best auROC (mouse)0.8394749038909938
Peak sets in benchmark (human)28
Peak sets in benchmark (mouse)3
Aligned words507
TF familybHLH-ZIP factors{1.2.6}
TF subfamilyTFE3-like factors{1.2.6.1}
MGI104554
EntrezGene17342
UniProt IDMITF_MOUSE
UniProt ACQ08874
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.59282
0.0005 10.36432
0.0001 13.89443
GTEx tissue expression atlas Mitf expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0114.043.048.019.013.055.013.030.019.056.023.072.05.041.029.020.0
021.049.01.00.05.0180.01.09.02.0108.03.00.00.0134.01.06.0
031.01.06.00.0217.0102.045.0107.02.01.02.01.02.07.05.01.0
042.0135.09.076.00.077.03.031.01.049.04.04.02.075.07.025.0
050.00.05.00.063.08.0265.00.04.07.011.01.06.01.0126.03.0
060.00.00.073.00.00.00.016.02.00.02.0403.00.00.00.04.0
070.00.02.00.00.00.00.00.00.00.02.00.00.01.0495.00.0
080.00.00.00.01.00.00.00.0437.022.018.022.00.00.00.00.0
0911.0289.070.068.01.07.07.07.00.013.00.05.01.011.07.03.0
105.04.00.04.028.0134.020.0138.010.045.07.022.012.031.013.027.0
116.011.029.09.039.068.047.060.03.011.020.06.025.072.054.040.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.7880.3160.425-0.49-0.860.56-0.86-0.04-0.490.578-0.3020.828-1.770.269-0.074-0.439
02-3.1260.445-3.126-4.4-1.771.741-3.126-1.215-2.5841.231-2.234-4.4-4.41.446-3.126-1.6
03-3.126-3.126-1.6-4.41.9271.1740.3611.222-2.584-3.126-2.584-3.126-2.584-1.454-1.77-3.126
04-2.5841.454-1.2150.881-4.40.894-2.234-0.008-3.1260.445-1.975-1.975-2.5840.868-1.454-0.22
05-4.4-4.4-1.77-4.40.695-1.3282.127-4.4-1.975-1.454-1.022-3.126-1.6-3.1261.385-2.234
06-4.4-4.4-4.40.841-4.4-4.4-4.4-0.658-2.584-4.4-2.5842.546-4.4-4.4-4.4-1.975
07-4.4-4.4-2.584-4.4-4.4-4.4-4.4-4.4-4.4-4.4-2.584-4.4-4.4-3.1262.751-4.4
08-4.4-4.4-4.4-4.4-3.126-4.4-4.4-4.42.626-0.346-0.543-0.346-4.4-4.4-4.4-4.4
09-1.0222.2130.80.771-3.126-1.454-1.454-1.454-4.4-0.86-4.4-1.77-3.126-1.022-1.454-2.234
10-1.77-1.975-4.4-1.975-0.1081.446-0.4391.476-1.1140.361-1.454-0.346-0.938-0.008-0.86-0.144
11-1.6-1.022-0.074-1.2150.2190.7710.4040.646-2.234-1.022-0.439-1.6-0.220.8280.5420.244