Model info
Transcription factorMitf
ModelMITF_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusbChYGTGMYh
Best auROC (human)0.9957576734925564
Best auROC (mouse)0.8350890002994752
Peak sets in benchmark (human)28
Peak sets in benchmark (mouse)3
Aligned words501
TF familybHLH-ZIP factors{1.2.6}
TF subfamilyTFE3-like factors{1.2.6.1}
MGI104554
EntrezGene17342
UniProt IDMITF_MOUSE
UniProt ACQ08874
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.68629
0.0005 5.41913
0.0001 7.10018
GTEx tissue expression atlas Mitf expression
ReMap ChIP-seq dataset list Mitf datasets
Motifs in JASPAR
PCM
ACGT
0145.0198.088.0169.0
022.0486.06.06.0
03228.0107.030.0135.0
044.0311.023.0162.0
0559.036.0400.05.0
068.01.011.0480.0
070.06.0490.04.0
08387.058.029.026.0
096.0365.048.081.0
1040.0195.034.0231.0
PWM
ACGT
01-1.00.455-0.3460.298
02-3.5731.349-2.819-2.819
030.595-0.153-1.3890.076
04-3.1260.904-1.640.256
05-0.737-1.2151.155-2.961
06-2.584-3.903-2.3111.336
07-4.4-2.8191.357-3.126
081.122-0.754-1.421-1.525
09-2.8191.063-0.938-0.427
10-1.1140.44-1.270.608