Model info
Transcription factorMitf
ModelMITF_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusbChYGTGMYh
Best auROC (human)0.9957576734925564
Best auROC (mouse)0.8350890002994752
Peak sets in benchmark (human)28
Peak sets in benchmark (mouse)3
Aligned words501
TF familybHLH-ZIP factors{1.2.6}
TF subfamilyTFE3-like factors{1.2.6.1}
MGI104554
EntrezGene17342
UniProt IDMITF_MOUSE
UniProt ACQ08874
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.68629
0.0005 5.41913
0.0001 7.10018
GTEx tissue expression atlas Mitf expression
Motifs in JASPAR
PCM
ACGT
0145.0198.088.0169.0
022.0486.06.06.0
03228.0107.030.0135.0
044.0311.023.0162.0
0559.036.0400.05.0
068.01.011.0480.0
070.06.0490.04.0
08387.058.029.026.0
096.0365.048.081.0
1040.0195.034.0231.0
PWM
ACGT
01-1.00.455-0.3460.298
02-3.5731.349-2.819-2.819
030.595-0.153-1.3890.076
04-3.1260.904-1.640.256
05-0.737-1.2151.155-2.961
06-2.584-3.903-2.3111.336
07-4.4-2.8191.357-3.126
081.122-0.754-1.421-1.525
09-2.8191.063-0.938-0.427
10-1.1140.44-1.270.608