Model info
Transcription factorMsx3
ModelMSX3_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length17
Quality
D
Motif rank
0
ConsensusTAATTGbWWdWTAATTd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words2675
TF family
TF subfamily
MGIMGI:106587
EntrezGeneGeneID:17703
(SSTAR profile)
UniProt IDMSX3_MOUSE
UniProt ACP70354
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -0.65199
0.0005 1.09376
0.0001 4.78046
GTEx tissue expression atlas Msx3 expression
Motifs in JASPAR
PCM
ACGT
01127.75125.75121.752299.75
022642.06.018.09.0
032672.01.01.01.0
041.750.758.752663.75
051.063.015.02596.0
06323.08.02281.063.0
07206.0790.01344.0335.0
08821.0191.0134.01529.0
09849.0226.0148.01452.0
10355.0326.0382.01612.0
11353.0260.0171.01891.0
1212.05.00.02658.0
132596.00.049.030.0
142663.250.251.2510.25
153.255.255.252661.25
1610.58.5101.52554.5
17644.0325.01357.0349.0
PWM
ACGT
01-1.643-1.658-1.691.233
021.372-4.432-3.514-4.113
031.383-5.419-5.419-5.419
04-5.194-5.507-4.1361.38
05-5.419-2.334-3.6771.354
06-0.725-4.2081.225-2.334
07-1.1710.1660.697-0.688
080.205-1.246-1.5960.825
090.238-1.079-1.4980.774
10-0.631-0.715-0.5580.878
11-0.636-0.94-1.3551.038
12-3.871-4.566-5.8291.378
131.354-5.829-2.577-3.043
141.38-5.71-5.338-4.005
15-4.855-4.531-4.5311.379
16-3.985-4.16-1.8691.338
17-0.038-0.7180.706-0.648