Model info
Transcription factorMsx3
ModelMSX3_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length17
Quality
D
Motif rank
0
ConsensusTAATTGbWWdWTAATTd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words2675
TF family
TF subfamily
MGI106587
EntrezGene17703
UniProt IDMSX3_MOUSE
UniProt ACP70354
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -0.66239
0.0005 1.10041
0.0001 4.78061
GTEx tissue expression atlas Msx3 expression
ReMap ChIP-seq dataset list Msx3 datasets
Motifs in JASPAR
PCM
ACGT
01127.75125.75121.752299.75
022642.06.018.09.0
032672.01.01.01.0
041.750.758.752663.75
051.063.015.02596.0
06323.08.02281.063.0
07206.0790.01344.0335.0
08821.0191.0134.01529.0
09849.0226.0148.01452.0
10355.0326.0382.01612.0
11353.0260.0171.01891.0
1212.05.00.02658.0
132596.00.049.030.0
142663.250.251.2510.25
153.255.255.252661.25
1610.58.5101.52554.5
17644.0325.01357.0349.0
PWM
ACGT
01-1.643-1.658-1.691.233
021.372-4.432-3.514-4.113
031.383-5.419-5.419-5.419
04-5.194-5.507-4.1361.38
05-5.419-2.334-3.6771.354
06-0.725-4.2081.225-2.334
07-1.1710.1660.697-0.688
080.205-1.246-1.5960.825
090.238-1.079-1.4980.774
10-0.631-0.715-0.5580.878
11-0.636-0.94-1.3551.038
12-3.871-4.566-5.8291.378
131.354-5.829-2.577-3.043
141.38-5.71-5.338-4.005
15-4.855-4.531-4.5311.379
16-3.985-4.16-1.8691.338
17-0.038-0.7180.706-0.648