Model info
| Transcription factor | MYC (GeneCards) | ||||||||
| Model | MYC_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vMCACGTGShb | ||||||||
| Best auROC (human) | 0.947 | ||||||||
| Best auROC (mouse) | 0.948 | ||||||||
| Peak sets in benchmark (human) | 265 | ||||||||
| Peak sets in benchmark (mouse) | 126 | ||||||||
| Aligned words | 501 | ||||||||
| TF family | bHLH-ZIP factors {1.2.6} | ||||||||
| TF subfamily | Myc / Max factors {1.2.6.5} | ||||||||
| HGNC | HGNC:7553 | ||||||||
| EntrezGene | GeneID:4609 (SSTAR profile) | ||||||||
| UniProt ID | MYC_HUMAN | ||||||||
| UniProt AC | P01106 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | MYC expression | ||||||||
| ReMap ChIP-seq dataset list | MYC datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 110.0 | 105.0 | 215.0 | 70.0 |
| 02 | 84.0 | 375.0 | 26.0 | 15.0 |
| 03 | 10.0 | 485.0 | 2.0 | 3.0 |
| 04 | 436.0 | 3.0 | 43.0 | 18.0 |
| 05 | 1.0 | 344.0 | 2.0 | 153.0 |
| 06 | 10.0 | 11.0 | 478.0 | 1.0 |
| 07 | 7.0 | 19.0 | 0.0 | 474.0 |
| 08 | 2.0 | 4.0 | 488.0 | 6.0 |
| 09 | 25.0 | 287.0 | 109.0 | 79.0 |
| 10 | 98.0 | 99.0 | 82.0 | 221.0 |
| 11 | 34.0 | 191.0 | 101.0 | 174.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.126 | -0.172 | 0.537 | -0.57 |
| 02 | -0.392 | 1.09 | -1.525 | -2.034 |
| 03 | -2.394 | 1.347 | -3.573 | -3.325 |
| 04 | 1.241 | -3.325 | -1.044 | -1.868 |
| 05 | -3.903 | 1.004 | -3.573 | 0.2 |
| 06 | -2.394 | -2.311 | 1.332 | -3.903 |
| 07 | -2.694 | -1.818 | -4.4 | 1.324 |
| 08 | -3.573 | -3.126 | 1.353 | -2.819 |
| 09 | -1.561 | 0.824 | -0.135 | -0.452 |
| 10 | -0.24 | -0.23 | -0.415 | 0.565 |
| 11 | -1.27 | 0.42 | -0.21 | 0.327 |