Model info
Transcription factorMyf5
ModelMYF5_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
D
Motif rank
0
ConsensusbCASCTGTYnh
Best auROC (human)
Best auROC (mouse)0.7866114934348412
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)2
Aligned words449
TF familyMyoD / ASC-related factors{1.2.2}
TF subfamilyMyogenic transcription factors{1.2.2.1}
MGI97252
EntrezGene17877
UniProt IDMYF5_MOUSE
UniProt ACP24699
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.120935
0.0005 6.007515
0.0001 7.8420000000000005
GTEx tissue expression atlas Myf5 expression
Motifs in JASPAR
PCM
ACGT
0171.0133.0168.076.0
026.0424.07.011.0
03438.01.02.07.0
0411.0113.0303.021.0
056.0412.04.026.0
067.05.00.0436.0
074.019.0366.059.0
081.076.010.0361.0
091.0144.036.0267.0
1098.0164.067.0119.0
1180.0178.050.0140.0
PWM
ACGT
01-0.4480.170.401-0.381
02-2.7141.321-2.589-2.204
031.354-3.805-3.472-2.589
04-2.2040.0090.987-1.617
05-2.7141.293-3.023-1.417
06-2.589-2.856-4.3091.349
07-3.023-1.711.175-0.629
08-3.805-0.381-2.2871.161
09-3.8050.248-1.1070.861
10-0.1320.377-0.5050.06
11-0.3310.458-0.790.22