Model info
Transcription factorMYF6
(GeneCards)
ModelMYF6_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length7
Quality
C
Motif rank
0
ConsensusCAGCTGC
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words9
TF familyMyoD / ASC-related factors {1.2.2}
TF subfamilyMyogenic transcription factors {1.2.2.1}
HGNCHGNC:7566
EntrezGeneGeneID:4618
(SSTAR profile)
UniProt IDMYF6_HUMAN
UniProt ACP23409
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.965059999999999
0.0005 5.42243
0.0001 7.020125
GTEx tissue expression atlas MYF6 expression
ReMap ChIP-seq dataset list MYF6 datasets
Motifs in JASPAR
PCM
ACGT
010.07.00.00.0
027.00.00.00.0
030.03.0483.9520.0
040.07.00.00.0
050.00.00.07.0
060.00.07.00.0
070.2265.3060.2261.242
PWM
ACGT
01-1.5251.208-1.525-1.525
021.208-1.525-1.525-1.525
03-1.5250.4580.685-1.525
04-1.5251.208-1.525-1.525
05-1.525-1.525-1.5251.208
06-1.525-1.5251.208-1.525
07-1.1440.952-1.144-0.258