Model info
Transcription factorNanog
ModelNANOG_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length22
Quality
A
Motif rank
0
ConsensusnbbYWTTvWnWTKYWRAdndnn
Best auROC (human)0.9237176227306271
Best auROC (mouse)0.9436606678947459
Peak sets in benchmark (human)15
Peak sets in benchmark (mouse)38
Aligned words513
TF familyNK-related factors{3.1.2}
TF subfamilyNANOG{3.1.2.12}
MGI1919200
EntrezGene71950
UniProt IDNANOG_MOUSE
UniProt ACQ80Z64
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.306360000000002
0.0005 13.08316
0.0001 16.80066
GTEx tissue expression atlas Nanog expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
017.92720.64235.53925.33811.05725.9664.88665.53711.51823.83844.17964.2647.61532.78834.98883.917
021.79316.96811.7147.6426.33568.4814.35524.0636.82268.05925.35519.3569.898105.79654.94968.414
030.010.7193.01511.11424.38110.9322.085121.9075.5950.8277.79432.1633.77971.78211.62732.286
0411.7251.8825.9814.162102.6746.7124.151130.72216.6262.0260.05.86983.4628.02310.66695.319
052.7635.03810.22196.4660.02.8710.015.7720.01.8916.05212.8546.9419.9514.828224.352
064.830.00.04.8751.0370.9280.017.7871.9070.9791.81516.39932.79810.05611.882394.707
076.30610.66922.6210.9755.1432.9830.03.8374.0582.8244.8132.00236.322119.548246.22431.675
0821.3720.964.0725.42778.7353.1581.91452.21852.3951.8744.814214.57512.8851.071.89622.638
0953.07728.28654.54229.4810.9532.0751.0632.9713.9410.02.8585.89476.92364.50550.997122.433
10118.6454.3073.9038.03962.3942.1473.18127.14487.0427.0482.90512.46598.76425.25214.92421.839
1121.7443.72810.504330.8698.1424.1271.15725.3280.9481.070.022.8951.0662.0620.88565.473
122.8871.13821.8696.0061.8981.0270.08.0620.00.08.1424.4058.8644.105317.455114.141
130.9689.7890.9451.9480.02.9681.1372.16512.053192.88446.02596.5034.09671.08518.05239.38
1414.0780.00.03.039148.75134.5861.86891.52232.9483.96412.93116.31663.20914.8845.85256.052
15191.9852.23157.0347.73618.8460.9510.033.63817.4731.1072.070.0116.0582.09432.50816.27
16309.54213.01713.7728.035.2750.00.01.10778.395.8671.9475.40950.663.021.8912.073
1793.58439.65865.716244.9087.087.8710.06.9534.9320.9311.8499.8980.01.9231.04313.654
1822.09719.70516.34247.45214.72514.5110.99620.15118.82618.44916.15715.17637.69437.843110.03889.839
1925.7048.12440.30619.20746.07411.1273.29930.00855.53123.09840.21124.69429.38616.17651.2475.815
2058.83133.50344.03920.32220.50318.9135.07914.0348.4742.76819.54624.27253.29538.30130.93327.196
2136.49736.46182.00726.13432.03246.0025.80649.64519.99131.4128.86419.33211.34316.51429.5628.403
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.336-0.4080.127-0.207-1.017-0.183-1.7920.734-0.977-0.2670.3430.715-1.3740.0470.1120.98
02-2.674-0.6-0.961-1.371-1.5490.778-1.898-0.258-1.4790.772-0.206-0.472-1.1241.2110.5590.777
03-4.4-1.047-2.229-1.012-0.2451.258-2.5491.352-1.6660.482-1.3520.028-2.0270.825-0.9680.032
04-0.96-2.634-1.603-0.7771.181-1.494-1.9421.422-0.62-2.573-4.4-1.6210.975-1.325-1.0521.107
05-2.306-1.763-1.0931.828-4.4-2.273-4.4-0.672-4.4-2.63-1.592-0.871-1.462-1.118-1.8031.961
06-1.802-4.4-4.4-1.794-3.1-3.18-4.4-0.554-2.623-3.142-2.664-0.6340.048-1.108-0.9472.525
07-1.553-1.051-0.318-3.145-1.744-2.239-4.4-2.013-1.962-2.287-1.805-2.5830.1491.3332.0530.013
08-0.374-3.155-1.96-0.2030.917-2.189-2.6210.5080.512-2.638-1.8051.916-0.869-3.077-2.628-0.318
090.525-0.0980.552-0.058-3.16-2.553-3.082-2.243-1.989-4.4-2.277-1.6170.8930.7180.4851.356
101.325-1.908-1.998-1.3230.685-2.524-2.182-0.1391.016-1.448-2.263-0.9011.142-0.21-0.726-0.353
11-0.357-2.039-1.0662.349-1.311-1.947-3.019-0.207-3.164-3.077-4.4-0.307-3.08-2.558-3.2130.733
12-2.268-3.032-0.352-1.599-2.627-3.107-4.4-1.32-4.4-4.4-1.311-1.887-1.229-1.9522.3071.286
13-3.149-1.134-3.167-2.606-4.4-2.243-3.032-2.517-0.9331.810.3831.119-1.9540.815-0.540.229
14-0.783-4.4-4.4-2.2221.5510.1-2.6411.0660.052-1.984-0.865-0.6390.698-0.728-1.6230.579
151.805-2.4920.596-1.359-0.498-3.162-4.40.073-0.572-3.052-2.555-4.41.303-2.5450.039-0.641
162.282-0.859-0.804-1.324-1.72-4.4-4.4-3.0520.912-1.621-2.606-1.6970.478-2.228-2.631-2.554
171.0890.2360.7372.048-1.444-1.343-4.4-1.461-1.783-3.178-2.649-1.124-4.4-2.616-3.096-0.812
18-0.342-0.454-0.6370.413-0.739-0.753-3.129-0.432-0.499-0.519-0.648-0.7090.1850.1891.251.048
19-0.193-1.3130.252-0.4790.384-1.011-2.149-0.040.57-0.2980.249-0.232-0.061-0.6470.490.879
200.6270.0690.339-0.424-0.415-0.494-1.756-0.7860.4350.31-0.462-0.2490.5290.201-0.01-0.137
210.1530.1520.957-0.1760.0240.383-1.6310.458-0.440.005-0.078-0.473-0.992-0.627-0.055-0.094