Model info
Transcription factorNFATC1
ModelNFAC1_HUMAN.H11MO.1.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
B
Motif rank
1
ConsensusvvWGGAAARn
Best auROC (human)0.7924925541268304
Best auROC (mouse)0.8275786085644161
Peak sets in benchmark (human)7
Peak sets in benchmark (mouse)8
Aligned words500
TF familyNFAT-related factors{6.1.3}
TF subfamilyNFATc1{6.1.3.0.1}
HGNC7775
EntrezGene4772
UniProt IDNFAC1_HUMAN
UniProt ACO95644
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.71635
0.0005 7.02408
0.0001 8.61726
GTEx tissue expression atlas NFATC1 expression
ReMap ChIP-seq dataset list NFATC1 datasets
Motifs in JASPAR
PCM
ACGT
01239.091.0113.057.0
02239.087.097.077.0
0397.014.017.0372.0
042.00.0497.01.0
051.00.0497.02.0
06486.02.011.01.0
07494.02.01.03.0
08474.05.014.07.0
09286.092.098.024.0
10209.027.055.0209.0
PWM
ACGT
010.642-0.313-0.1-0.771
020.642-0.357-0.25-0.477
03-0.25-2.096-1.921.082
04-3.573-4.41.371-3.903
05-3.903-4.41.371-3.573
061.349-3.573-2.311-3.903
071.365-3.573-3.903-3.325
081.324-2.961-2.096-2.694
090.821-0.302-0.24-1.6
100.509-1.489-0.8050.509